G1711136


Basic Information

Item Value
gene id G1711136
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 16499191 ~ 16499452 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1960357
CATTATATCTCTACCCATAAGGCATAGCTGTTTTcccccacacactcacaaacacatccTTGAAAAAATATAAAAAGTTGCAGTGCTGTTATGTCACATTCACTGGAAACAGGATTTGTCACAGAGAGAAAGCTATACTGTGTAAATTGTCTCTCTGCAGGTTATTAGTAGGATGATATGAATATGCTGTGTTGATCCTCTCTGACCGATGATGGATTTTTTATTCTTCATTTTAACACGGAGGTCACATTGAGACTTGAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1960357 True 262 lncRNA 0.37 1 16499191 16499452

Neighbor

gene id symbol gene type direction distance location
LOC110499838 LOC106609638 coding upstream 200599 16291473 ~ 16298592 (+)
copg2 copg2 coding upstream 575400 15908444 ~ 15923791 (+)
LOC110518420 LOC106593864 coding upstream 593517 15902931 ~ 15905674 (+)
LOC110490786 LOC106576567 coding upstream 610080 15870190 ~ 15889111 (+)
col7a1l LOC106576558 coding upstream 632473 15779575 ~ 15866718 (+)
LOC110499856 LOC106609654 coding downstream 94975 16594427 ~ 16600458 (+)
LOC110499844 LOC106609653 coding downstream 104807 16604259 ~ 16608641 (+)
LOC110499863 tap26 coding downstream 240917 16740369 ~ 16742407 (+)
LOC110499861 LOC106609625 coding downstream 243343 16742795 ~ 16758777 (+)
LOC110501007 LOC106576552 coding downstream 262945 16762397 ~ 16825929 (+)
G1711129 NA non-coding upstream 19396 16479545 ~ 16479795 (+)
G1711126 NA non-coding upstream 25788 16473061 ~ 16473403 (+)
G1711122 NA non-coding upstream 31414 16467015 ~ 16467777 (+)
G1711121 NA non-coding upstream 33274 16465525 ~ 16465917 (+)
G1711115 NA non-coding upstream 55378 16443597 ~ 16443813 (+)
G1711137 NA non-coding downstream 904 16500356 ~ 16500582 (+)
G1711152 NA non-coding downstream 24168 16523620 ~ 16524534 (+)
LOC110499847 LOC106609634 non-coding downstream 27123 16318043 ~ 16528816 (+)
G1711174 NA non-coding downstream 79213 16578665 ~ 16578963 (+)
G1711141 NA non-coding downstream 101098 16600550 ~ 16601602 (+)
G1710901 mest other upstream 562770 15931098 ~ 15936421 (+)
LOC110500994 LOC106609603 other upstream 761714 15700619 ~ 15737550 (+)
LOC110499821 LOC106609608 other upstream 1008320 15462544 ~ 15700037 (+)
G1710321 NA other upstream 1365603 15133132 ~ 15133588 (+)
G1709840 NA other upstream 1816983 14679482 ~ 14682208 (+)
G1711795 NA other downstream 220468 16719920 ~ 16720552 (+)
LOC110501009 LOC105020375 other downstream 414768 16914013 ~ 16973778 (+)
G1712658 NA other downstream 1166828 17666280 ~ 17668586 (+)

Expression


Co-expression Network