Gene
RNA
| Item | Value |
|---|---|
| gene id | G1711137 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 16500356 ~ 16500582 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1960358 | True | 227 | lncRNA | 0.53 | 1 | 16500356 | 16500582 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499838 | LOC106609638 | coding | upstream | 201764 | 16291473 ~ 16298592 (+) |
| copg2 | copg2 | coding | upstream | 576565 | 15908444 ~ 15923791 (+) |
| LOC110518420 | LOC106593864 | coding | upstream | 594682 | 15902931 ~ 15905674 (+) |
| LOC110490786 | LOC106576567 | coding | upstream | 611245 | 15870190 ~ 15889111 (+) |
| col7a1l | LOC106576558 | coding | upstream | 633638 | 15779575 ~ 15866718 (+) |
| LOC110499856 | LOC106609654 | coding | downstream | 93845 | 16594427 ~ 16600458 (+) |
| LOC110499844 | LOC106609653 | coding | downstream | 103677 | 16604259 ~ 16608641 (+) |
| LOC110499863 | tap26 | coding | downstream | 239787 | 16740369 ~ 16742407 (+) |
| LOC110499861 | LOC106609625 | coding | downstream | 242213 | 16742795 ~ 16758777 (+) |
| LOC110501007 | LOC106576552 | coding | downstream | 261815 | 16762397 ~ 16825929 (+) |
| G1711136 | NA | non-coding | upstream | 904 | 16499191 ~ 16499452 (+) |
| G1711129 | NA | non-coding | upstream | 20561 | 16479545 ~ 16479795 (+) |
| G1711126 | NA | non-coding | upstream | 26953 | 16473061 ~ 16473403 (+) |
| G1711122 | NA | non-coding | upstream | 32579 | 16467015 ~ 16467777 (+) |
| G1711121 | NA | non-coding | upstream | 34439 | 16465525 ~ 16465917 (+) |
| G1711152 | NA | non-coding | downstream | 23038 | 16523620 ~ 16524534 (+) |
| LOC110499847 | LOC106609634 | non-coding | downstream | 25993 | 16318043 ~ 16528816 (+) |
| G1711174 | NA | non-coding | downstream | 78083 | 16578665 ~ 16578963 (+) |
| G1711141 | NA | non-coding | downstream | 99968 | 16600550 ~ 16601602 (+) |
| G1711142 | NA | non-coding | downstream | 101150 | 16601732 ~ 16602382 (+) |
| G1710901 | mest | other | upstream | 563935 | 15931098 ~ 15936421 (+) |
| LOC110500994 | LOC106609603 | other | upstream | 762879 | 15700619 ~ 15737550 (+) |
| LOC110499821 | LOC106609608 | other | upstream | 1009485 | 15462544 ~ 15700037 (+) |
| G1710321 | NA | other | upstream | 1366768 | 15133132 ~ 15133588 (+) |
| G1709840 | NA | other | upstream | 1818148 | 14679482 ~ 14682208 (+) |
| G1711795 | NA | other | downstream | 219338 | 16719920 ~ 16720552 (+) |
| LOC110501009 | LOC105020375 | other | downstream | 413638 | 16914013 ~ 16973778 (+) |
| G1712658 | NA | other | downstream | 1165698 | 17666280 ~ 17668586 (+) |
