G1711795


Basic Information

Item Value
gene id G1711795
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 16719920 ~ 16720552 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1961165
TTATTAATACAATATGGTATAGTACACCCCATAGCACAGTATGACTGGCAGAAACCAAAGAAGGCAAAAGTagagaaaacactaaacaatgaTCCCATTCCCACATCTGTACGTGACTGAGTAAGCAGTACATAATCACATTAAACCCTTGCTAAAATCATGGTCAGcaaattgaaaaaaataaaacatacaaaTGGCAGGAAATGCAGGTTGTCCCATCTCCAAGAACTCTATGATGCCATCCCAGGTGCCTTCACTCCAACAACTCCGTCCCAGGTGCCTTCACCTTCACTCCGACAACTCCGTCCCAGGTGCCTTCACTCCGACAACTCCGCCCCAGGTGCCTTCACTCCGACAACTCCGCCCCAGGTGCCTTCACTCCGACAACTCCGTCCCATGTGCCTTCACTCCGACAACTCCATCCCAGATGCCTTCACTCCGACCTAAGTGCCTTCACTCTGACA
>TU1961166
TTATTAATACAATATGGTATAGTACACCCCATAGCACAGTATGACTGGCAGAAACCAAAGAAGGCAAAAGTagagaaaacactaaacaatgaTCCCATTCCCACATCTGTACGTGACTGAGTAAGCAGTACATAATCACATTAAACCCTTGCTAAAATCATGGTCAGcaaattgaaaaaaataaaacatacaaaTGGCAGGAAATGCAGGTTGTCCCATCTCCAAGAACTCTATGATGCCATCCCAGGTGCCTTCACTCCAACAACTCCGTCCCAGGTGCCTTCACCTTCACTCCGACAACTCCGTCCCAGGTGCCTTCACTCCGACAACTCCGCCCCAGGTGCCTTCACTCCGACAACTCCGTCCCATGTGCCTTCACTCCGACAACTCCATCCCAGATGCCTTCACTCCGACCTAAGTGCCTTCACTCTGACAACTCCATCCCAGGTGTCTTCACTCCGACAACTCCGTAACAGCGTGGCGACAACAGTGGATCAAAGAGCTGCACCAGAGTGGA
>TU1961163
ACAGTATGACTGGCAGAAACCAAAGAAGGCAAAAGTagagaaaacactaaacaatgaTCCCATTCCCACATCTGTACGTGACTGAGTAAGCAGTACATAATCACATTAAACCCTTGCTAAAATCATGGTCAGcaaattgaaaaaaataaaacatacaaaTGGCAGGAAATGCAGGTTGTCCCATCTCCAAGAACTCTATGATGCCATCCCAGGTGCCTTCACTCCAACAACTCCGTCCCAGGTGCCTTCACCTTCACTCCGACAACTCCGTCCCAGGTGCCTTCACTCCGACAACTCCGTCCCAGGTGCCTTCACTCCGACAACTCCGCCCCAGGTGCCTTCACTCCGACAACTCCGCCCCAGGTGCCTTCACTCCGACAACTCCGTCCCATGTGCCTTCACTCCGACAACTCCATCCCAGATGCCTTCACTCCGACCTAAGTGCCTTCACTCTGACA
>TU1961164
ACAGTATGACTGGCAGAAACCAAAGAAGGCAAAAGTagagaaaacactaaacaatgaTCCCATTCCCACATCTGTACGTGACTGAGTAAGCAGTACATAATCACATTAAACCCTTGCTAAAATCATGGTCAGcaaattgaaaaaaataaaacatacaaaTGGCAGGAAATGCAGGTTGTCCCATCTCCAAGAACTCTATGATGCCATCCCAGGTGCCTTCACTCCAACAACTCCGTCCCAGGTGCCTTCACCTTCACTCCGACAACTCCGTCCCAGGTGCCTTCACTCCGACAACTCCGTCCCAGGTGCCTTCACTCCGACAACTCCGCCCCAGGTGCCTTCACTCCGACAACTCCGTCCCATGTGCCTTCACTCCGACAACTCCATCCCAGATGCCTTCACTCCGACCTAAGTGCCTTCACTCTGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1961165 False 464 TUCP 0.48 3 16719920 16720470
TU1961166 False 517 TUCP 0.48 4 16719920 16720552
TU1961163 False 458 TUCP 0.50 3 16719955 16720470
TU1961164 True 429 TUCP 0.49 4 16719955 16720470

Neighbor

gene id symbol gene type direction distance location
LOC110499844 LOC106609653 coding upstream 111279 16604259 ~ 16608641 (+)
LOC110499856 LOC106609654 coding upstream 119462 16594427 ~ 16600458 (+)
LOC110499847 LOC106609634 coding upstream 193514 16318043 ~ 16528816 (+)
LOC110499838 LOC106609638 coding upstream 421328 16291473 ~ 16298592 (+)
copg2 copg2 coding upstream 796129 15908444 ~ 15923791 (+)
LOC110499863 tap26 coding downstream 19817 16740369 ~ 16742407 (+)
LOC110499861 LOC106609625 coding downstream 22243 16742795 ~ 16758777 (+)
LOC110501007 LOC106576552 coding downstream 41845 16762397 ~ 16825929 (+)
LOC110501009 LOC105020375 coding downstream 193461 16914013 ~ 16973778 (+)
LOC110516649 LOC106609628 coding downstream 281865 17002417 ~ 17063380 (+)
G1711194 NA non-coding upstream 93869 16625845 ~ 16626051 (+)
G1711193 NA non-coding upstream 95427 16624175 ~ 16624493 (+)
G1711192 NA non-coding upstream 95881 16623640 ~ 16624039 (+)
G1711191 NA non-coding upstream 98159 16621461 ~ 16621761 (+)
G1711142 NA non-coding upstream 117538 16601732 ~ 16602382 (+)
G1711804 NA non-coding downstream 38267 16758819 ~ 16759573 (+)
G1711808 LOC106576486 non-coding downstream 40882 16761434 ~ 16763632 (+)
G1711809 NA non-coding downstream 46201 16766753 ~ 16768908 (+)
G1711836 NA non-coding downstream 120720 16841272 ~ 16841488 (+)
G1710901 mest other upstream 783499 15931098 ~ 15936421 (+)
LOC110500994 LOC106609603 other upstream 982443 15700619 ~ 15737550 (+)
LOC110499821 LOC106609608 other upstream 1229049 15462544 ~ 15700037 (+)
G1710321 NA other upstream 1586332 15133132 ~ 15133588 (+)
G1712658 NA other downstream 945728 17666280 ~ 17668586 (+)
si:dkey-159a18.1 LOC106609576 other downstream 1545143 18247128 ~ 18268691 (+)
G1713262 NA other downstream 1776595 18497147 ~ 18500874 (+)

Expression


Co-expression Network