G1711947 (LOC106609625)


Basic Information

Item Value
gene id G1711947
gene name LOC106609625
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 16742840 ~ 16745864 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1961353
tgtaccttaacCCTTGAAATTAACTTGTTTgtttgtctagttttgatttacatttgtcaactaatgtgaattcaacaaaaaatgtcactaTGTCATTGAATTAAGGTTAAAGGTTAGGTGAAAAAAATACGAACATCCCTttgttgatgacttttttcaaatccaattatTTTCCCACAGTGATTCAACGTCATCAAATTAAATGttttggttgaaatgacgtggaaacaacgttgattcgatcagtttttgcccagtgggttttGACATAATTCCCATAATTGTCCCTCTGTCAAAACGATTATCTAAGCATGGCTGCATCAATGGGGTAGACATCTATGTCCATAACATCTAAGTTTCTAACAAGTGTAAAACTGAGACAAAACAAGCCCCCCCCATCGCCCCCTCCTCGAACCCTCATATCGGTGCGTGTGATGAAGCCTTTGCCCTCCACATCGCAGGTCTGGAAGAATTCCTTGGTCTTATCCAGCATGGCGATGCTTCCCCAGTCAGAACCCCTCCTGTCTGAACTCTTCCTCATGGGGACAGCTCCTCCTCTGCCCTTGGCCTCAGACTCCTCCATGTCACTAGATATACTTCTGCAGAGTATTCTGGTGGCTCTGAACAAGGTAGAATCAGACATGGCTGTCTCACTCCTCGGCCTGGCCGGTTGGGGTCATGGTGAGCGATGAGACCAGGCACCACAAGTCAGTAGTGATGAGGCCACAGAGACTAAGAGTTTTCATATCTCAGTAAATGGTCTGTCTAGGAGTTTTCATATCTCAGTAAATGGTCTGTCTAGGAGTTTTCATATCTCAGTAAATGGTCTGTCTAGGAGTTTTCATATCTCAGTAAATGGTCTGTCTAGGAGTTTTCATATCTCAGTAAATGGTCTGTCTAGGAGTTTTCATATCTCAGTAAATGGTTTGTCTAGGAGTTTTCATATCTCAGTAAATGGTCTGTCTAGGAGTTTTCATATCTCAGTAAATGGTCTGTCTAGGAGTTTTCATATCTCAGTAAATGGTCTGTCTAGGAGTTTTCATATCTCAGTAAATGGTCTGTCTAGGAGTTTTCATATCTCAGTAAATGGTCTGTCTAGTACCTTTTTATATCCAAAAGATTAAGATATTAGCCCTGAAACTTACAACGTGGACCAAAATACAGAAAGCGATGATCGCACTTCCTATTTAGGAAGTTCTTGCCTCTCA

Function

NR:

description
EF-hand calcium-binding domain-containing protein 4B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1961353 True 1208 TUCP 0.41 2 16742840 16745864

Neighbor

gene id symbol gene type direction distance location
LOC110501003 LOC106576525 coding downstream 2537 16719898 ~ 16740303 (-)
LOC110499846 LOC106576554 coding downstream 42273 16613901 ~ 16700567 (-)
LOC110499843 LOC105020363 coding downstream 149628 16573934 ~ 16593212 (-)
LOC110514342 LOC106609637 coding downstream 196662 16530059 ~ 16546178 (-)
LOC118936578 st8sia1 coding downstream 458493 16259629 ~ 16284347 (-)
LOC118942893 LOC105020372 coding upstream 12936 16758800 ~ 16777177 (-)
LOC110499869 NA coding upstream 435582 17181446 ~ 17187956 (-)
LOC110518924 LOC106576509 coding upstream 576783 17322647 ~ 17325861 (-)
LOC110499875 LOC106576481 coding upstream 730271 17476135 ~ 17481386 (-)
LOC110499880 LOC106576467 coding upstream 1384235 18130099 ~ 18134351 (-)
G1711946 NA non-coding downstream 436 16742104 ~ 16742404 (-)
G1711788 NA non-coding downstream 32538 16709962 ~ 16710302 (-)
G1711749 NA non-coding downstream 92739 16649685 ~ 16650101 (-)
G1711723 NA non-coding downstream 130180 16612215 ~ 16612660 (-)
G1711958 NA non-coding upstream 26342 16772206 ~ 16773349 (-)
G1711967 NA non-coding upstream 46337 16792201 ~ 16795933 (-)
G1711970 NA non-coding upstream 54427 16800291 ~ 16809851 (-)
G1711971 NA non-coding upstream 59339 16805203 ~ 16811114 (-)
G1711976 LOC106576551 non-coding upstream 69231 16815095 ~ 16837791 (-)
G1711655 LOC106609634 other downstream 301702 16439773 ~ 16441138 (-)
G1711339 NA other downstream 1004322 15736992 ~ 15738518 (-)
G1710680 NA other downstream 1387095 15353964 ~ 15355745 (-)
G1712050 NA other upstream 256750 17002614 ~ 17003700 (-)
G1712424 NA other upstream 549655 17295519 ~ 17295735 (-)
G1713604 NA other upstream 1724649 18470513 ~ 18470817 (-)
G1713637 NA other upstream 1848740 18519287 ~ 18605517 (-)

Expression


Co-expression Network