Gene
RNA
| Item | Value |
|---|---|
| gene id | G1711839 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 16844218 ~ 16849468 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1961231 | True | 421 | lncRNA | 0.46 | 4 | 16844218 | 16849468 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501007 | LOC106576552 | coding | upstream | 18289 | 16762397 ~ 16825929 (+) |
| LOC110499861 | LOC106609625 | coding | upstream | 85441 | 16742795 ~ 16758777 (+) |
| LOC110499863 | tap26 | coding | upstream | 101819 | 16740369 ~ 16742407 (+) |
| LOC110499844 | LOC106609653 | coding | upstream | 235577 | 16604259 ~ 16608641 (+) |
| LOC110499856 | LOC106609654 | coding | upstream | 243760 | 16594427 ~ 16600458 (+) |
| LOC110501009 | LOC105020375 | coding | downstream | 64545 | 16914013 ~ 16973778 (+) |
| LOC110516649 | LOC106609628 | coding | downstream | 152949 | 17002417 ~ 17063380 (+) |
| LOC110499865 | LOC106576572 | coding | downstream | 239501 | 17088969 ~ 17247292 (+) |
| LOC110501011 | LOC105020379 | coding | downstream | 422537 | 17272005 ~ 17319991 (+) |
| LOC110499879 | snd1 | coding | downstream | 494963 | 17344431 ~ 17655507 (+) |
| G1711837 | NA | non-coding | upstream | 1770 | 16842239 ~ 16842448 (+) |
| G1711836 | NA | non-coding | upstream | 2730 | 16841272 ~ 16841488 (+) |
| G1711809 | NA | non-coding | upstream | 75310 | 16766753 ~ 16768908 (+) |
| G1711808 | LOC106576486 | non-coding | upstream | 80586 | 16761434 ~ 16763632 (+) |
| G1711804 | NA | non-coding | upstream | 84645 | 16758819 ~ 16759573 (+) |
| G1711851 | NA | non-coding | downstream | 16773 | 16866241 ~ 16866522 (+) |
| G1711858 | NA | non-coding | downstream | 26726 | 16876194 ~ 16876704 (+) |
| G1711898 | NA | non-coding | downstream | 95892 | 16945360 ~ 16945627 (+) |
| G1711902 | NA | non-coding | downstream | 100161 | 16949629 ~ 16949877 (+) |
| G1711904 | NA | non-coding | downstream | 105989 | 16955457 ~ 16955694 (+) |
| G1711795 | NA | other | upstream | 123666 | 16719920 ~ 16720552 (+) |
| LOC110499847 | LOC106609634 | other | upstream | 315402 | 16318043 ~ 16528816 (+) |
| G1710901 | mest | other | upstream | 907797 | 15931098 ~ 15936421 (+) |
| LOC110500994 | LOC106609603 | other | upstream | 1106741 | 15700619 ~ 15737550 (+) |
| G1712658 | NA | other | downstream | 816812 | 17666280 ~ 17668586 (+) |
| si:dkey-159a18.1 | LOC106609576 | other | downstream | 1416227 | 18247128 ~ 18268691 (+) |
| G1713262 | NA | other | downstream | 1647679 | 18497147 ~ 18500874 (+) |
| G1713384 | NA | other | downstream | 1885323 | 18734791 ~ 18737436 (+) |
