G1711898


Basic Information

Item Value
gene id G1711898
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 16945360 ~ 16945627 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1961295
gtgtgtgtgtctatgtgtgtgtttgagagagagagatgaagtgagtgtgtgtgggtgtgccgTCTGATTGTGTGCGTtatcgcagagagagagagagagagagagagagagagagagagagagagagagagagagagagtgtgttgtaTGTATCAGATTGTGTGTGTTATCTCATGTGGGGTTTACACACAACCCTCGTGTTGTATCTGCTTCTAATTTCATGGCTGAGTGCACATgcagtggaggggagggggctcTAGGATTATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1961295 True 268 lncRNA 0.48 1 16945360 16945627

Neighbor

gene id symbol gene type direction distance location
LOC110501007 LOC106576552 coding upstream 119431 16762397 ~ 16825929 (+)
LOC110499861 LOC106609625 coding upstream 186583 16742795 ~ 16758777 (+)
LOC110499863 tap26 coding upstream 202961 16740369 ~ 16742407 (+)
LOC110499844 LOC106609653 coding upstream 336719 16604259 ~ 16608641 (+)
LOC110499856 LOC106609654 coding upstream 344902 16594427 ~ 16600458 (+)
LOC110516649 LOC106609628 coding downstream 56790 17002417 ~ 17063380 (+)
LOC110499865 LOC106576572 coding downstream 143342 17088969 ~ 17247292 (+)
LOC110501011 LOC105020379 coding downstream 326378 17272005 ~ 17319991 (+)
LOC110499879 snd1 coding downstream 398804 17344431 ~ 17655507 (+)
LOC110499878 LOC106576496 coding downstream 1198906 18144533 ~ 18203141 (+)
G1711858 NA non-coding upstream 68656 16876194 ~ 16876704 (+)
G1711851 NA non-coding upstream 78838 16866241 ~ 16866522 (+)
G1711839 NA non-coding upstream 95892 16844218 ~ 16849468 (+)
G1711837 NA non-coding upstream 102912 16842239 ~ 16842448 (+)
G1711836 NA non-coding upstream 103872 16841272 ~ 16841488 (+)
G1711902 NA non-coding downstream 4002 16949629 ~ 16949877 (+)
G1711904 NA non-coding downstream 9830 16955457 ~ 16955694 (+)
LOC110501009 LOC105020375 non-coding downstream 26007 16914013 ~ 16973778 (+)
G1711908 NA non-coding downstream 34541 16980168 ~ 16982189 (+)
G1711909 NA non-coding downstream 39549 16985176 ~ 16985412 (+)
G1711795 NA other upstream 224808 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 416544 16318043 ~ 16528816 (+)
G1710901 mest other upstream 1008939 15931098 ~ 15936421 (+)
G1712658 NA other downstream 720653 17666280 ~ 17668586 (+)
si:dkey-159a18.1 LOC106609576 other downstream 1320068 18247128 ~ 18268691 (+)
G1713262 NA other downstream 1551520 18497147 ~ 18500874 (+)
G1713384 NA other downstream 1789164 18734791 ~ 18737436 (+)
G1714090 NA other downstream 2439345 19384972 ~ 19754609 (+)

Expression


Co-expression Network