Gene
RNA
| Item | Value |
|---|---|
| gene id | G1711908 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 16980168 ~ 16982189 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106583365 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1961305 | False | 222 | lncRNA | 0.51 | 2 | 16980168 | 16982189 |
| TU1961306 | True | 248 | lncRNA | 0.51 | 2 | 16980168 | 16981687 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501009 | LOC105020375 | coding | upstream | 6390 | 16914013 ~ 16973778 (+) |
| LOC110501007 | LOC106576552 | coding | upstream | 154239 | 16762397 ~ 16825929 (+) |
| LOC110499861 | LOC106609625 | coding | upstream | 221391 | 16742795 ~ 16758777 (+) |
| LOC110499863 | tap26 | coding | upstream | 237769 | 16740369 ~ 16742407 (+) |
| LOC110499844 | LOC106609653 | coding | upstream | 371527 | 16604259 ~ 16608641 (+) |
| LOC110516649 | LOC106609628 | coding | downstream | 20228 | 17002417 ~ 17063380 (+) |
| LOC110499865 | LOC106576572 | coding | downstream | 106780 | 17088969 ~ 17247292 (+) |
| LOC110501011 | LOC105020379 | coding | downstream | 289816 | 17272005 ~ 17319991 (+) |
| LOC110499879 | snd1 | coding | downstream | 362242 | 17344431 ~ 17655507 (+) |
| LOC110499878 | LOC106576496 | coding | downstream | 1162344 | 18144533 ~ 18203141 (+) |
| G1711904 | NA | non-coding | upstream | 24474 | 16955457 ~ 16955694 (+) |
| G1711902 | NA | non-coding | upstream | 30291 | 16949629 ~ 16949877 (+) |
| G1711898 | NA | non-coding | upstream | 34541 | 16945360 ~ 16945627 (+) |
| G1711858 | NA | non-coding | upstream | 103464 | 16876194 ~ 16876704 (+) |
| G1711909 | NA | non-coding | downstream | 2987 | 16985176 ~ 16985412 (+) |
| G1711911 | NA | non-coding | downstream | 11741 | 16993930 ~ 16994129 (+) |
| G1711912 | NA | non-coding | downstream | 12537 | 16994726 ~ 16996423 (+) |
| G1711845 | NA | non-coding | downstream | 17420 | 16999609 ~ 16999854 (+) |
| G1711917 | NA | non-coding | downstream | 27094 | 17009283 ~ 17009574 (+) |
| G1711795 | NA | other | upstream | 259616 | 16719920 ~ 16720552 (+) |
| LOC110499847 | LOC106609634 | other | upstream | 451352 | 16318043 ~ 16528816 (+) |
| G1710901 | mest | other | upstream | 1043747 | 15931098 ~ 15936421 (+) |
| G1712658 | NA | other | downstream | 684091 | 17666280 ~ 17668586 (+) |
| si:dkey-159a18.1 | LOC106609576 | other | downstream | 1283506 | 18247128 ~ 18268691 (+) |
| G1713262 | NA | other | downstream | 1514958 | 18497147 ~ 18500874 (+) |
| G1713384 | NA | other | downstream | 1752602 | 18734791 ~ 18737436 (+) |
| G1714090 | NA | other | downstream | 2402783 | 19384972 ~ 19754609 (+) |
