G1711909


Basic Information

Item Value
gene id G1711909
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 16985176 ~ 16985412 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1961307
gcgtagagaaaacactgccatgggctgtagagaaaacactgccatgggctgtagagaaaaTGTAGCAGTTGTAAAGcagttttctgcaattctacacattttgtaatgacttATGTCGTGTTAATATAAGAgctgagtgagaatgactaacacAATCAATGGATCCCCCTGGAGGTCAGgtcatgattactacaagtttagatagctggctagactatctgccaggctatatacagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1961307 True 237 lncRNA 0.41 1 16985176 16985412

Neighbor

gene id symbol gene type direction distance location
LOC110501009 LOC105020375 coding upstream 11398 16914013 ~ 16973778 (+)
LOC110501007 LOC106576552 coding upstream 159247 16762397 ~ 16825929 (+)
LOC110499861 LOC106609625 coding upstream 226399 16742795 ~ 16758777 (+)
LOC110499863 tap26 coding upstream 242777 16740369 ~ 16742407 (+)
LOC110499844 LOC106609653 coding upstream 376535 16604259 ~ 16608641 (+)
LOC110516649 LOC106609628 coding downstream 17005 17002417 ~ 17063380 (+)
LOC110499865 LOC106576572 coding downstream 103557 17088969 ~ 17247292 (+)
LOC110501011 LOC105020379 coding downstream 286593 17272005 ~ 17319991 (+)
LOC110499879 snd1 coding downstream 359019 17344431 ~ 17655507 (+)
LOC110499878 LOC106576496 coding downstream 1159121 18144533 ~ 18203141 (+)
G1711908 NA non-coding upstream 2987 16980168 ~ 16982189 (+)
G1711904 NA non-coding upstream 29482 16955457 ~ 16955694 (+)
G1711902 NA non-coding upstream 35299 16949629 ~ 16949877 (+)
G1711898 NA non-coding upstream 39549 16945360 ~ 16945627 (+)
G1711911 NA non-coding downstream 8518 16993930 ~ 16994129 (+)
G1711912 NA non-coding downstream 9314 16994726 ~ 16996423 (+)
G1711845 NA non-coding downstream 14197 16999609 ~ 16999854 (+)
G1711917 NA non-coding downstream 23871 17009283 ~ 17009574 (+)
G1711922 NA non-coding downstream 31754 17017166 ~ 17017365 (+)
G1711795 NA other upstream 264624 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 456360 16318043 ~ 16528816 (+)
G1710901 mest other upstream 1048755 15931098 ~ 15936421 (+)
G1712658 NA other downstream 680868 17666280 ~ 17668586 (+)
si:dkey-159a18.1 LOC106609576 other downstream 1280283 18247128 ~ 18268691 (+)
G1713262 NA other downstream 1511735 18497147 ~ 18500874 (+)
G1713384 NA other downstream 1749379 18734791 ~ 18737436 (+)
G1714090 NA other downstream 2399560 19384972 ~ 19754609 (+)

Expression


Co-expression Network