Gene
RNA
| Item | Value |
|---|---|
| gene id | G1711912 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 16994726 ~ 16996423 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1961310 | True | 547 | lncRNA | 0.33 | 2 | 16994726 | 16996423 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501009 | LOC105020375 | coding | upstream | 20948 | 16914013 ~ 16973778 (+) |
| LOC110501007 | LOC106576552 | coding | upstream | 168797 | 16762397 ~ 16825929 (+) |
| LOC110499861 | LOC106609625 | coding | upstream | 235949 | 16742795 ~ 16758777 (+) |
| LOC110499863 | tap26 | coding | upstream | 252327 | 16740369 ~ 16742407 (+) |
| LOC110499844 | LOC106609653 | coding | upstream | 386085 | 16604259 ~ 16608641 (+) |
| LOC110516649 | LOC106609628 | coding | downstream | 5994 | 17002417 ~ 17063380 (+) |
| LOC110499865 | LOC106576572 | coding | downstream | 92546 | 17088969 ~ 17247292 (+) |
| LOC110501011 | LOC105020379 | coding | downstream | 275582 | 17272005 ~ 17319991 (+) |
| LOC110499879 | snd1 | coding | downstream | 348008 | 17344431 ~ 17655507 (+) |
| LOC110499878 | LOC106576496 | coding | downstream | 1148110 | 18144533 ~ 18203141 (+) |
| G1711911 | NA | non-coding | upstream | 597 | 16993930 ~ 16994129 (+) |
| G1711909 | NA | non-coding | upstream | 9314 | 16985176 ~ 16985412 (+) |
| G1711908 | NA | non-coding | upstream | 12537 | 16980168 ~ 16982189 (+) |
| G1711904 | NA | non-coding | upstream | 39032 | 16955457 ~ 16955694 (+) |
| G1711845 | NA | non-coding | downstream | 3186 | 16999609 ~ 16999854 (+) |
| G1711917 | NA | non-coding | downstream | 12860 | 17009283 ~ 17009574 (+) |
| G1711922 | NA | non-coding | downstream | 20743 | 17017166 ~ 17017365 (+) |
| G1711927 | NA | non-coding | downstream | 27258 | 17023681 ~ 17023913 (+) |
| G1711929 | NA | non-coding | downstream | 51448 | 17047871 ~ 17048135 (+) |
| G1711795 | NA | other | upstream | 274174 | 16719920 ~ 16720552 (+) |
| LOC110499847 | LOC106609634 | other | upstream | 465910 | 16318043 ~ 16528816 (+) |
| G1710901 | mest | other | upstream | 1058305 | 15931098 ~ 15936421 (+) |
| G1712658 | NA | other | downstream | 669857 | 17666280 ~ 17668586 (+) |
| si:dkey-159a18.1 | LOC106609576 | other | downstream | 1269272 | 18247128 ~ 18268691 (+) |
| G1713262 | NA | other | downstream | 1500724 | 18497147 ~ 18500874 (+) |
| G1713384 | NA | other | downstream | 1738368 | 18734791 ~ 18737436 (+) |
| G1714090 | NA | other | downstream | 2388549 | 19384972 ~ 19754609 (+) |
