G1711917


Basic Information

Item Value
gene id G1711917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 17009283 ~ 17009574 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1961315
GATCCAATCCATTCAAGGATGCTTCATGAAACTGAACTTGTTGATTGATGGAGAGCTACATAGAGCCCTGAGTCCTTTGTGATGAAGAGGAATAGATAGATGATGTGAGTCATTGGTCTAGGACAGAGCATGGTGCTGGATGGCCATGTGAACGAGGCTGCTCCTGCCCCAGTCTACCTACCTCAGTACACTGACTCATCCAACCCTTTCTCTGCTTCGTCAGCAGACATGCCTTGCCTCTGTCACTCTCCCAACACTTGCTCCGAGCtgagaatttgtgtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1961315 True 292 lncRNA 0.49 1 17009283 17009574

Neighbor

gene id symbol gene type direction distance location
LOC110501009 LOC105020375 coding upstream 35505 16914013 ~ 16973778 (+)
LOC110501007 LOC106576552 coding upstream 183354 16762397 ~ 16825929 (+)
LOC110499861 LOC106609625 coding upstream 250506 16742795 ~ 16758777 (+)
LOC110499863 tap26 coding upstream 266884 16740369 ~ 16742407 (+)
LOC110499844 LOC106609653 coding upstream 400642 16604259 ~ 16608641 (+)
LOC110499865 LOC106576572 coding downstream 79395 17088969 ~ 17247292 (+)
LOC110501011 LOC105020379 coding downstream 262431 17272005 ~ 17319991 (+)
LOC110499879 snd1 coding downstream 334857 17344431 ~ 17655507 (+)
LOC110499878 LOC106576496 coding downstream 1134959 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 1175772 18185346 ~ 18186325 (+)
G1711845 NA non-coding upstream 9429 16999609 ~ 16999854 (+)
G1711912 NA non-coding upstream 12860 16994726 ~ 16996423 (+)
G1711911 NA non-coding upstream 15154 16993930 ~ 16994129 (+)
G1711909 NA non-coding upstream 23871 16985176 ~ 16985412 (+)
G1711908 NA non-coding upstream 27094 16980168 ~ 16982189 (+)
G1711922 NA non-coding downstream 7592 17017166 ~ 17017365 (+)
G1711927 NA non-coding downstream 14107 17023681 ~ 17023913 (+)
G1711929 NA non-coding downstream 38297 17047871 ~ 17048135 (+)
G1711930 NA non-coding downstream 47963 17057537 ~ 17057871 (+)
G1711931 NA non-coding downstream 48379 17057953 ~ 17058299 (+)
G1711795 NA other upstream 288731 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 480467 16318043 ~ 16528816 (+)
G1710901 mest other upstream 1072862 15931098 ~ 15936421 (+)
G1712658 NA other downstream 656706 17666280 ~ 17668586 (+)
si:dkey-159a18.1 LOC106609576 other downstream 1256121 18247128 ~ 18268691 (+)
G1713262 NA other downstream 1487573 18497147 ~ 18500874 (+)
G1713384 NA other downstream 1725217 18734791 ~ 18737436 (+)
G1714090 NA other downstream 2375398 19384972 ~ 19754609 (+)

Expression


Co-expression Network