G1712107


Basic Information

Item Value
gene id G1712107
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 17150808 ~ 17151285 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1961569
TGTTGagtgaaaatgtgtttgtttaGATTTTCAGTCTATAATAACTTCCTGTGTTGACAGCCTTACTAGTGGTTGTAGAAGTAGAGCCAGTTGTTTGAATTAGCCATGATAAGGTGAGCCAGTTGTTTGAATTAGTCATGATAAGGTGAGCCAGTTGTTTGAATTAGTCATGATAAGGTGAGCCAGTTGTTTGAATTAGCCATAATAAGGTGAGCCAGTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1961569 True 222 lncRNA 0.37 2 17150808 17151285

Neighbor

gene id symbol gene type direction distance location
LOC110516649 LOC106609628 coding upstream 87428 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 177030 16914013 ~ 16973778 (+)
LOC110501007 LOC106576552 coding upstream 324879 16762397 ~ 16825929 (+)
LOC110499861 LOC106609625 coding upstream 392031 16742795 ~ 16758777 (+)
LOC110499863 tap26 coding upstream 408409 16740369 ~ 16742407 (+)
LOC110501011 LOC105020379 coding downstream 120720 17272005 ~ 17319991 (+)
LOC110499879 snd1 coding downstream 193146 17344431 ~ 17655507 (+)
LOC110499878 LOC106576496 coding downstream 993248 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 1034061 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 1091809 18243094 ~ 18244775 (+)
G1711841 NA non-coding upstream 84942 17063519 ~ 17065866 (+)
G1711934 NA non-coding upstream 89834 17060707 ~ 17060974 (+)
G1711933 NA non-coding upstream 90499 17060091 ~ 17060309 (+)
G1711931 NA non-coding upstream 92509 17057953 ~ 17058299 (+)
G1711930 NA non-coding upstream 92937 17057537 ~ 17057871 (+)
G1712116 NA non-coding downstream 23085 17174370 ~ 17174808 (+)
G1712121 NA non-coding downstream 29465 17180750 ~ 17183952 (+)
G1712154 NA non-coding downstream 127621 17278906 ~ 17279147 (+)
G1712159 NA non-coding downstream 139741 17291026 ~ 17291239 (+)
G1712160 NA non-coding downstream 139963 17291248 ~ 17291758 (+)
G1711795 NA other upstream 430256 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 621992 16318043 ~ 16528816 (+)
G1710901 mest other upstream 1214387 15931098 ~ 15936421 (+)
G1712658 NA other downstream 514995 17666280 ~ 17668586 (+)
si:dkey-159a18.1 LOC106609576 other downstream 1114410 18247128 ~ 18268691 (+)
G1713262 NA other downstream 1345862 18497147 ~ 18500874 (+)
G1713384 NA other downstream 1583506 18734791 ~ 18737436 (+)
G1714090 NA other downstream 2233687 19384972 ~ 19754609 (+)

Expression


Co-expression Network