G1712116


Basic Information

Item Value
gene id G1712116
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 17174370 ~ 17174808 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1961578
tccagttgtctctctctctctctccagttctctctttctctctctccagttgtctctttctctctctccagttctctcttctctctctccagttgtctctctttctctctctccagttctctctttctctctctccagttctctctctttctctctctccagttctctctctttctctctctccagttctctctctttctctctctccagttctctctttctctctctctagttgtctctttctctctctccagttgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1961578 True 259 lncRNA 0.46 2 17174370 17174808

Neighbor

gene id symbol gene type direction distance location
LOC110516649 LOC106609628 coding upstream 110990 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 200592 16914013 ~ 16973778 (+)
LOC110501007 LOC106576552 coding upstream 348441 16762397 ~ 16825929 (+)
LOC110499861 LOC106609625 coding upstream 415593 16742795 ~ 16758777 (+)
LOC110499863 tap26 coding upstream 431971 16740369 ~ 16742407 (+)
LOC110501011 LOC105020379 coding downstream 97197 17272005 ~ 17319991 (+)
LOC110499879 snd1 coding downstream 169623 17344431 ~ 17655507 (+)
LOC110499878 LOC106576496 coding downstream 969725 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 1010538 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 1068286 18243094 ~ 18244775 (+)
G1712107 NA non-coding upstream 23085 17150808 ~ 17151285 (+)
G1711841 NA non-coding upstream 108504 17063519 ~ 17065866 (+)
G1711934 NA non-coding upstream 113396 17060707 ~ 17060974 (+)
G1711933 NA non-coding upstream 114061 17060091 ~ 17060309 (+)
G1711931 NA non-coding upstream 116071 17057953 ~ 17058299 (+)
G1712121 NA non-coding downstream 5942 17180750 ~ 17183952 (+)
G1712154 NA non-coding downstream 104098 17278906 ~ 17279147 (+)
G1712159 NA non-coding downstream 116218 17291026 ~ 17291239 (+)
G1712160 NA non-coding downstream 116440 17291248 ~ 17291758 (+)
G1712161 NA non-coding downstream 117530 17292338 ~ 17292750 (+)
G1711795 NA other upstream 453818 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 645554 16318043 ~ 16528816 (+)
G1710901 mest other upstream 1237949 15931098 ~ 15936421 (+)
G1712658 NA other downstream 491472 17666280 ~ 17668586 (+)
si:dkey-159a18.1 LOC106609576 other downstream 1090887 18247128 ~ 18268691 (+)
G1713262 NA other downstream 1322339 18497147 ~ 18500874 (+)
G1713384 NA other downstream 1559983 18734791 ~ 18737436 (+)
G1714090 NA other downstream 2210164 19384972 ~ 19754609 (+)

Expression


Co-expression Network