G1712154


Basic Information

Item Value
gene id G1712154
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 17278906 ~ 17279147 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1961620
gatggagagagatggatagagagagaaaaagaaagaaacaaggaaggagagagagtgaagggagagagagagtagagaaagagagagagagagtgtagagagagtgtagaaAGAGTGTAGATAgagtgtagagagggagagagagagagaaagaaagaaagaaagtgtagagagagagaagagagagagtaaagagagcgcagagagagtagagatgtaTAGACTGAGGTAATGTGCTATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1961620 True 242 lncRNA 0.43 1 17278906 17279147

Neighbor

gene id symbol gene type direction distance location
LOC110499865 LOC106576572 coding upstream 31614 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 215526 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 305128 16914013 ~ 16973778 (+)
LOC110501007 LOC106576552 coding upstream 452977 16762397 ~ 16825929 (+)
LOC110499861 LOC106609625 coding upstream 520129 16742795 ~ 16758777 (+)
LOC110499879 snd1 coding downstream 65284 17344431 ~ 17655507 (+)
LOC110499878 LOC106576496 coding downstream 865386 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 906199 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 963947 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 967981 18247128 ~ 18268691 (+)
G1712121 NA non-coding upstream 94954 17180750 ~ 17183952 (+)
G1712116 NA non-coding upstream 104098 17174370 ~ 17174808 (+)
G1712107 NA non-coding upstream 127621 17150808 ~ 17151285 (+)
G1711841 NA non-coding upstream 213040 17063519 ~ 17065866 (+)
G1711934 NA non-coding upstream 217932 17060707 ~ 17060974 (+)
G1712159 NA non-coding downstream 11879 17291026 ~ 17291239 (+)
G1712160 NA non-coding downstream 12101 17291248 ~ 17291758 (+)
G1712161 NA non-coding downstream 13191 17292338 ~ 17292750 (+)
G1712170 NA non-coding downstream 35515 17314662 ~ 17314943 (+)
G1712182 NA non-coding downstream 59396 17338543 ~ 17343616 (+)
LOC110499863 tap26 other upstream 537688 16740369 ~ 16742407 (+)
G1711795 NA other upstream 558354 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 750090 16318043 ~ 16528816 (+)
G1710901 mest other upstream 1342485 15931098 ~ 15936421 (+)
G1712658 NA other downstream 387133 17666280 ~ 17668586 (+)
G1713262 NA other downstream 1218000 18497147 ~ 18500874 (+)
G1713384 NA other downstream 1455644 18734791 ~ 18737436 (+)
G1714090 NA other downstream 2105825 19384972 ~ 19754609 (+)

Expression


Co-expression Network