G1712159


Basic Information

Item Value
gene id G1712159
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 17291026 ~ 17291239 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1961625
tacagtgagggaaaaaagtatttgatcccctgctgattttgtacgtttacccactgacaaagaaatgattggtctataattttaatggtacgtttatttgaacagtgagagacagaataacaacaacaaaaatccagaaaaacacatgtcaaaaatgttaaaaattgatttgcattttaatgagggaaacaAGTAtgtgacccctctgcaaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1961625 True 214 lncRNA 0.33 1 17291026 17291239

Neighbor

gene id symbol gene type direction distance location
LOC110499865 LOC106576572 coding upstream 43734 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 227646 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 317248 16914013 ~ 16973778 (+)
LOC110501007 LOC106576552 coding upstream 465097 16762397 ~ 16825929 (+)
LOC110499861 LOC106609625 coding upstream 532249 16742795 ~ 16758777 (+)
LOC110499879 snd1 coding downstream 53192 17344431 ~ 17655507 (+)
LOC110499878 LOC106576496 coding downstream 853294 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 894107 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 951855 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 955889 18247128 ~ 18268691 (+)
G1712154 NA non-coding upstream 11879 17278906 ~ 17279147 (+)
G1712121 NA non-coding upstream 107074 17180750 ~ 17183952 (+)
G1712116 NA non-coding upstream 116218 17174370 ~ 17174808 (+)
G1712107 NA non-coding upstream 139741 17150808 ~ 17151285 (+)
G1711841 NA non-coding upstream 225160 17063519 ~ 17065866 (+)
G1712160 NA non-coding downstream 9 17291248 ~ 17291758 (+)
G1712161 NA non-coding downstream 1099 17292338 ~ 17292750 (+)
G1712170 NA non-coding downstream 23423 17314662 ~ 17314943 (+)
G1712182 NA non-coding downstream 47304 17338543 ~ 17343616 (+)
G1712230 NA non-coding downstream 159587 17450826 ~ 17451445 (+)
LOC110499863 tap26 other upstream 549808 16740369 ~ 16742407 (+)
G1711795 NA other upstream 570474 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 762210 16318043 ~ 16528816 (+)
G1710901 mest other upstream 1354605 15931098 ~ 15936421 (+)
G1712658 NA other downstream 375041 17666280 ~ 17668586 (+)
G1713262 NA other downstream 1205908 18497147 ~ 18500874 (+)
G1713384 NA other downstream 1443552 18734791 ~ 18737436 (+)
G1714090 NA other downstream 2093733 19384972 ~ 19754609 (+)

Expression


Co-expression Network