G1712170


Basic Information

Item Value
gene id G1712170
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 17314662 ~ 17314943 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1961639
GTTTAGCTGTACCCCTAGTGGgtggtttagctgtactcctagtgagcggtttagctgtactcctagtgggcggtttagctgtactcctagtgagcggtttagctgtactcctaGTGAGCGGTTTAGCTGTGCTCCTCGTgagtggtttagctgtactcctagtgagtggtttagctgtactcctagtgagtggtttagctgtactcctagtgagtggtttagctgtactcctag

Function

NR:

description
PREDICTED: C-C chemokine receptor type 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1961639 True 234 lncRNA 0.50 2 17314662 17314943

Neighbor

gene id symbol gene type direction distance location
LOC110499865 LOC106576572 coding upstream 67370 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 251282 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 340884 16914013 ~ 16973778 (+)
LOC110501007 LOC106576552 coding upstream 488733 16762397 ~ 16825929 (+)
LOC110499861 LOC106609625 coding upstream 555885 16742795 ~ 16758777 (+)
LOC110499879 snd1 coding downstream 29488 17344431 ~ 17655507 (+)
LOC110499878 LOC106576496 coding downstream 829590 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 870403 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 928151 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 932185 18247128 ~ 18268691 (+)
G1712161 NA non-coding upstream 21912 17292338 ~ 17292750 (+)
G1712160 NA non-coding upstream 22904 17291248 ~ 17291758 (+)
G1712159 NA non-coding upstream 23423 17291026 ~ 17291239 (+)
G1712154 NA non-coding upstream 35515 17278906 ~ 17279147 (+)
G1712121 NA non-coding upstream 130710 17180750 ~ 17183952 (+)
G1712182 NA non-coding downstream 23600 17338543 ~ 17343616 (+)
G1712230 NA non-coding downstream 135883 17450826 ~ 17451445 (+)
G1712143 NA non-coding downstream 150933 17465876 ~ 17476207 (+)
G1712277 NA non-coding downstream 216885 17531828 ~ 17532343 (+)
G1712289 NA non-coding downstream 238399 17553342 ~ 17554502 (+)
LOC110499863 tap26 other upstream 573444 16740369 ~ 16742407 (+)
G1711795 NA other upstream 594110 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 785846 16318043 ~ 16528816 (+)
G1710901 mest other upstream 1378241 15931098 ~ 15936421 (+)
G1712658 NA other downstream 351337 17666280 ~ 17668586 (+)
G1713262 NA other downstream 1182204 18497147 ~ 18500874 (+)
G1713384 NA other downstream 1419848 18734791 ~ 18737436 (+)
G1714090 NA other downstream 2070029 19384972 ~ 19754609 (+)

Expression


Co-expression Network