G1712289


Basic Information

Item Value
gene id G1712289
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 17553342 ~ 17554502 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1961764
GACATTAGGTTTAATAATGATCCCAAGGTAGTCAAAGACATTACGTTTAATAATGATCCCAAAGTAGTCAGACATTAGGTTTAATAATGATCCCAAAGTAGTCAGACATTAGGTTTAATAATGATCCCAAAGTTGTCAGACATTAGGTTTAATAATGATCCCAAAGTAGTCAGACATTAGGTTTAATAATGATCCCAAAGTAGTCAGACATTAGGTTTAATAATAATCCCAAAGTAGTCAAAGACATTAGGTTTAATAATGATCCCAAAGTAGTCAGACATTAGGTTTAATAATAATCCCAAAGTAGTCAAAGACATTAGGTTTAATAATAATCCCAAAGTAGTCAAAGACATTAGGTTTAATAATGATCCCAAAGTAGTCAGACATTAGGTTTAATAATGATCCCAAAGTAGTCAGACATTAGGTTTAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1961764 True 433 lncRNA 0.31 3 17553342 17554502

Neighbor

gene id symbol gene type direction distance location
LOC110501011 LOC105020379 coding upstream 233351 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 306050 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 489962 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 579564 16914013 ~ 16973778 (+)
LOC110501007 LOC106576552 coding upstream 727413 16762397 ~ 16825929 (+)
LOC110499878 LOC106576496 coding downstream 590031 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 630844 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 688592 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 692626 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 716285 18270787 ~ 18290199 (+)
G1712277 NA non-coding upstream 20999 17531828 ~ 17532343 (+)
G1712143 NA non-coding upstream 77135 17465876 ~ 17476207 (+)
G1712230 NA non-coding upstream 101897 17450826 ~ 17451445 (+)
G1712182 NA non-coding upstream 209726 17338543 ~ 17343616 (+)
G1712170 NA non-coding upstream 238399 17314662 ~ 17314943 (+)
G1712308 NA non-coding downstream 35053 17589555 ~ 17590715 (+)
G1712319 NA non-coding downstream 60913 17615415 ~ 17615658 (+)
G1712656 NA non-coding downstream 107056 17661558 ~ 17661984 (+)
G1712677 NA non-coding downstream 125347 17679849 ~ 17680072 (+)
G1712703 NA non-coding downstream 148597 17703099 ~ 17703329 (+)
LOC110499863 tap26 other upstream 812124 16740369 ~ 16742407 (+)
G1711795 NA other upstream 832790 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1024526 16318043 ~ 16528816 (+)
G1710901 mest other upstream 1616921 15931098 ~ 15936421 (+)
G1712658 NA other downstream 111778 17666280 ~ 17668586 (+)
G1713262 NA other downstream 942645 18497147 ~ 18500874 (+)
G1713384 NA other downstream 1180289 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1830470 19384972 ~ 19754609 (+)

Expression


Co-expression Network