G1712308


Basic Information

Item Value
gene id G1712308
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 17589555 ~ 17590715 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1961783
catatgcatacgtatatactgtactctatatcatcgactgcatccttatgtaatacatgtatcattagccactttaactatgccactttgtttacatactcatctcatatgtatatactgtactcgataccatctactgtatcttgcctatgctgccctgtaccatcactcattcatatatccttatgtacatattctttatccccttacactgtgtataagacagtagttttggaattgttagttagattacttgttggttattactgcattgtcggaactagaagcaaaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataaaatttgatttagtTAGGAGCTAAGAGCTGACAGCGGTACagcctagaccagaccagaccagagttaGGAGCTAAGAGCTGACAGCGGTACAGCCTAGTCCAGACCAGAGTTAGGAGCTAAGAGCTGTCAGCGGTACAgcctagaccagaccagagttaGGAGCTAAGAGCTGATAGCGGTACAGCCTAGTCCAGACCAGAGTTAGGAGCTAAGAGCTGTCAGCGGTACAgcctagaccagaccagagttaGGAGCTAAGAGCTGACAGCGGTACAGCctagtccagaccagagTTAGGAGCTAAGAGCTGTCAGCGGTACAgcctagaccagaccagagttaGGAGCTAAGAGCTGACAGCGGTACAGCCTAGACCAGTCCAGACCAGAGTTAGTAGCTAAGAGCTGACAGCGGTACAGCctagtccagaccagaccagagttaGGAGCTAAGAGCTGACAGTGGTACAGCCTTCAAATGAGTGGTGGTTCCCCCAACCAGGTGCCACTCTGTCCACATTATTCACATTCTACCTTTACACCCAACAGCTGTTCTCCACCTAATGATGCTGGAACACCACTCAGTCACACTCCTTCCTACTATCATGCTGGTATTCAATCTCTCTCTTGTTCTGTTGCTAagtctatctttctccctcttgtTCCTTGTGCTCTGTGGTTTGGTCTCTGTCTTCTAgtttttctcattctctctccttatGTCTCACTCTCACCTCTCGCtaggtctctcgctctctct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1961783 True 1105 lncRNA 0.46 2 17589555 17590715

Neighbor

gene id symbol gene type direction distance location
LOC110501011 LOC105020379 coding upstream 269564 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 342263 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 526175 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 615777 16914013 ~ 16973778 (+)
LOC110501007 LOC106576552 coding upstream 763626 16762397 ~ 16825929 (+)
LOC110499878 LOC106576496 coding downstream 553818 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 594631 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 652379 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 656413 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 680072 18270787 ~ 18290199 (+)
G1712289 NA non-coding upstream 35053 17553342 ~ 17554502 (+)
G1712277 NA non-coding upstream 57212 17531828 ~ 17532343 (+)
G1712143 NA non-coding upstream 113348 17465876 ~ 17476207 (+)
G1712230 NA non-coding upstream 138110 17450826 ~ 17451445 (+)
G1712182 NA non-coding upstream 245939 17338543 ~ 17343616 (+)
G1712319 NA non-coding downstream 24700 17615415 ~ 17615658 (+)
G1712656 NA non-coding downstream 70843 17661558 ~ 17661984 (+)
G1712677 NA non-coding downstream 89134 17679849 ~ 17680072 (+)
G1712703 NA non-coding downstream 112384 17703099 ~ 17703329 (+)
G1712704 NA non-coding downstream 118475 17709190 ~ 17731791 (+)
LOC110499863 tap26 other upstream 848337 16740369 ~ 16742407 (+)
G1711795 NA other upstream 869003 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1060739 16318043 ~ 16528816 (+)
G1710901 mest other upstream 1653134 15931098 ~ 15936421 (+)
G1712658 NA other downstream 75565 17666280 ~ 17668586 (+)
G1713262 NA other downstream 906432 18497147 ~ 18500874 (+)
G1713384 NA other downstream 1144076 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1794257 19384972 ~ 19754609 (+)

Expression


Co-expression Network