G1712656


Basic Information

Item Value
gene id G1712656
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 17661558 ~ 17661984 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962169
GTATCATCACTGACTCTACCCTTCTGTCTTTTGTGCTGTGTCGCTGTCAAGACATTACTGACAAACCTTGtttctatttaatacatttaccatctgagtaaaagagagagacgagagagattaggccgatacccactaattatcaaaatccaggaaAGAGTTAAATTCTACACCGACCTAAAAGGATGCGATTCCCAATCCTTCCATAACAacaccatcacctacagagagatgaacctggagaagagtcccctaaccaaactggtcctggggctctgttcactaacacaccccacagagccccaggacagcaacacaattacacccaaccaaatcatgagaaaacaaaaagataattacttgacaaattggaaagaattaacaaaacaacagagcaaactagaatgctatttgcccctaaacagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962169 True 427 lncRNA 0.41 1 17661558 17661984

Neighbor

gene id symbol gene type direction distance location
LOC110499879 snd1 coding upstream 6051 17344431 ~ 17655507 (+)
LOC110501011 LOC105020379 coding upstream 341567 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 414266 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 598178 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 687780 16914013 ~ 16973778 (+)
LOC110499878 LOC106576496 coding downstream 482549 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 523362 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 581110 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 585144 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 608803 18270787 ~ 18290199 (+)
G1712319 NA non-coding upstream 45900 17615415 ~ 17615658 (+)
G1712308 NA non-coding upstream 70843 17589555 ~ 17590715 (+)
G1712289 NA non-coding upstream 107056 17553342 ~ 17554502 (+)
G1712277 NA non-coding upstream 129215 17531828 ~ 17532343 (+)
G1712143 NA non-coding upstream 185351 17465876 ~ 17476207 (+)
G1712677 NA non-coding downstream 17865 17679849 ~ 17680072 (+)
G1712703 NA non-coding downstream 41115 17703099 ~ 17703329 (+)
G1712704 NA non-coding downstream 47206 17709190 ~ 17731791 (+)
G1712708 NA non-coding downstream 77040 17739024 ~ 17739267 (+)
G1712729 NA non-coding downstream 91102 17753086 ~ 17753356 (+)
LOC110499863 tap26 other upstream 920340 16740369 ~ 16742407 (+)
G1711795 NA other upstream 941006 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1132742 16318043 ~ 16528816 (+)
G1710901 mest other upstream 1725137 15931098 ~ 15936421 (+)
G1712658 NA other downstream 4296 17666280 ~ 17668586 (+)
G1713262 NA other downstream 835163 18497147 ~ 18500874 (+)
G1713384 NA other downstream 1072807 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1722988 19384972 ~ 19754609 (+)

Expression


Co-expression Network