G1712704


Basic Information

Item Value
gene id G1712704
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 17709190 ~ 17731791 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962230
ttgcattgtggccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacactttttatggatatctttaagaaattgctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgctgtggtctgatactccttccatttcaatattatcgcttacacagtgctcctt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962230 True 386 lncRNA 0.44 2 17709190 17731791

Neighbor

gene id symbol gene type direction distance location
LOC110499879 snd1 coding upstream 53683 17344431 ~ 17655507 (+)
LOC110501011 LOC105020379 coding upstream 389199 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 461898 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 645810 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 735412 16914013 ~ 16973778 (+)
LOC110499878 LOC106576496 coding downstream 412742 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 453555 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 511303 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 515337 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 538996 18270787 ~ 18290199 (+)
G1712703 NA non-coding upstream 5861 17703099 ~ 17703329 (+)
G1712677 NA non-coding upstream 29118 17679849 ~ 17680072 (+)
G1712656 NA non-coding upstream 47206 17661558 ~ 17661984 (+)
G1712319 NA non-coding upstream 93532 17615415 ~ 17615658 (+)
G1712308 NA non-coding upstream 118475 17589555 ~ 17590715 (+)
G1712708 NA non-coding downstream 7233 17739024 ~ 17739267 (+)
G1712729 NA non-coding downstream 21295 17753086 ~ 17753356 (+)
G1712852 NA non-coding downstream 171603 17903394 ~ 17907873 (+)
G1712872 NA non-coding downstream 224193 17955984 ~ 17958013 (+)
G1712885 NA non-coding downstream 258466 17990257 ~ 17993841 (+)
G1712658 NA other upstream 40604 17666280 ~ 17668586 (+)
LOC110499863 tap26 other upstream 967972 16740369 ~ 16742407 (+)
G1711795 NA other upstream 988638 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1180374 16318043 ~ 16528816 (+)
G1713262 NA other downstream 765356 18497147 ~ 18500874 (+)
G1713384 NA other downstream 1003000 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1653181 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 2377407 20109125 ~ 20113891 (+)

Expression


Co-expression Network