G1712729


Basic Information

Item Value
gene id G1712729
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 17753086 ~ 17753356 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962255
tacaggcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgctgtactttttactccatagaTTTTTCCTGACACCCCAAAATACTAgttacattttcaatgcttagcaggacaggaaaatggtccaattcacgcacttatcaagagaacatccctggtcatccctactgcctctgatctggtggactcactgaaCACGCATGCTTTTTCATTTGTAAAATATGTTTGAGTGTTGgattgtgcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962255 True 271 lncRNA 0.41 1 17753086 17753356

Neighbor

gene id symbol gene type direction distance location
LOC110499879 snd1 coding upstream 97579 17344431 ~ 17655507 (+)
LOC110501011 LOC105020379 coding upstream 433095 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 505794 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 689706 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 779308 16914013 ~ 16973778 (+)
LOC110499878 LOC106576496 coding downstream 391177 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 431990 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 489738 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 493772 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 517431 18270787 ~ 18290199 (+)
G1712708 NA non-coding upstream 13819 17739024 ~ 17739267 (+)
G1712704 NA non-coding upstream 21295 17709190 ~ 17731791 (+)
G1712703 NA non-coding upstream 49757 17703099 ~ 17703329 (+)
G1712677 NA non-coding upstream 73014 17679849 ~ 17680072 (+)
G1712656 NA non-coding upstream 91102 17661558 ~ 17661984 (+)
G1712852 NA non-coding downstream 150038 17903394 ~ 17907873 (+)
G1712872 NA non-coding downstream 202628 17955984 ~ 17958013 (+)
G1712885 NA non-coding downstream 236901 17990257 ~ 17993841 (+)
G1712947 NA non-coding downstream 249526 18002882 ~ 18003279 (+)
G1712956 NA non-coding downstream 255377 18008733 ~ 18009131 (+)
G1712658 NA other upstream 84500 17666280 ~ 17668586 (+)
LOC110499863 tap26 other upstream 1011868 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1032534 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1224270 16318043 ~ 16528816 (+)
G1713262 NA other downstream 743791 18497147 ~ 18500874 (+)
G1713384 NA other downstream 981435 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1631616 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 2355842 20109125 ~ 20113891 (+)

Expression


Co-expression Network