G1712872


Basic Information

Item Value
gene id G1712872
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 17955984 ~ 17958013 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962414
ggagcagtatgtactaggagggagcagtatatactaggagggagcagtatgtactaggagggaacagtatgtactaggagggagcagtttgtactgggagggagcagtatatactaggagggagcagtatatactaggagggagcagtatgcacTAGGAAGGAGCAGTATATactaggagggagcagtatgtactaggagggagcagtatgcactaggagggagcagtatatactaggagggagcagtatgtactaggagggaacagtatgtactaggagggagcagtatatactaggagggagcagtat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106593226, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962414 True 310 lncRNA 0.48 2 17955984 17958013

Neighbor

gene id symbol gene type direction distance location
LOC110499879 snd1 coding upstream 300477 17344431 ~ 17655507 (+)
LOC110501011 LOC105020379 coding upstream 635993 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 708692 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 892604 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 982206 16914013 ~ 16973778 (+)
LOC110499878 LOC106576496 coding downstream 186520 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 227333 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 285081 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 289115 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 312774 18270787 ~ 18290199 (+)
G1712852 NA non-coding upstream 48111 17903394 ~ 17907873 (+)
G1712729 NA non-coding upstream 202628 17753086 ~ 17753356 (+)
G1712708 NA non-coding upstream 216717 17739024 ~ 17739267 (+)
G1712704 NA non-coding upstream 224193 17709190 ~ 17731791 (+)
G1712703 NA non-coding upstream 252655 17703099 ~ 17703329 (+)
G1712885 NA non-coding downstream 32244 17990257 ~ 17993841 (+)
G1712947 NA non-coding downstream 44869 18002882 ~ 18003279 (+)
G1712956 NA non-coding downstream 50720 18008733 ~ 18009131 (+)
G1712961 NA non-coding downstream 55628 18013641 ~ 18013847 (+)
G1712962 NA non-coding downstream 56199 18014212 ~ 18014453 (+)
G1712658 NA other upstream 287398 17666280 ~ 17668586 (+)
LOC110499863 tap26 other upstream 1214766 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1235432 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1427168 16318043 ~ 16528816 (+)
G1713262 NA other downstream 539134 18497147 ~ 18500874 (+)
G1713384 NA other downstream 776778 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1426959 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 2151185 20109125 ~ 20113891 (+)

Expression


Co-expression Network