G1712947


Basic Information

Item Value
gene id G1712947
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18002882 ~ 18003279 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962517
atttacaactgcgacctggccaagataaggcatagcagtgtgaacagtcaacacagagttacacatggagtaaacaattaacaagtcaataacacagtagaaaaaaggggagtctatatatacattgtgtgcaaaaggcatgagaaggtaggcaaataattacaattatgcagattaacactggagtgataaatgatcagatggtcatgtacaggtagagatattggtgtgcatatATCCTacatatccttatgtacatattctttatccccttacactgtgtacaagacagtagttttggaattgttagttagattacttgttattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962517 True 398 lncRNA 0.37 1 18002882 18003279

Neighbor

gene id symbol gene type direction distance location
LOC110499879 snd1 coding upstream 347375 17344431 ~ 17655507 (+)
LOC110501011 LOC105020379 coding upstream 682891 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 755590 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 939502 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 1029104 16914013 ~ 16973778 (+)
LOC110499878 LOC106576496 coding downstream 141254 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 182067 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 239815 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 243849 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 267508 18270787 ~ 18290199 (+)
G1712885 NA non-coding upstream 9041 17990257 ~ 17993841 (+)
G1712872 NA non-coding upstream 44869 17955984 ~ 17958013 (+)
G1712852 NA non-coding upstream 95009 17903394 ~ 17907873 (+)
G1712729 NA non-coding upstream 249526 17753086 ~ 17753356 (+)
G1712708 NA non-coding upstream 263615 17739024 ~ 17739267 (+)
G1712956 NA non-coding downstream 5454 18008733 ~ 18009131 (+)
G1712961 NA non-coding downstream 10362 18013641 ~ 18013847 (+)
G1712962 NA non-coding downstream 10933 18014212 ~ 18014453 (+)
G1712963 NA non-coding downstream 11236 18014515 ~ 18015348 (+)
G1712984 NA non-coding downstream 32630 18035909 ~ 18036132 (+)
G1712658 NA other upstream 334296 17666280 ~ 17668586 (+)
LOC110499863 tap26 other upstream 1261664 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1282330 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1474066 16318043 ~ 16528816 (+)
G1713262 NA other downstream 493868 18497147 ~ 18500874 (+)
G1713384 NA other downstream 731512 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1381693 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 2105919 20109125 ~ 20113891 (+)

Expression


Co-expression Network