G1712962


Basic Information

Item Value
gene id G1712962
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18014212 ~ 18014453 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962532
cctaatgactagtccaagacacctgacttaacctcctaatgactagtccaagacacctgacttaacctcctaatgactagtcaAGGACACCTGACTTAACCTCCTCatgactagtccaagacacctgacttaacctcctaatgactagtccaagacaTCTGACTAAACCTCCTAATGACGAGTCAACGACACCTGACTTAACCTACTAATAactagtccaagacacctgacttaactcctaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962532 True 242 lncRNA 0.43 1 18014212 18014453

Neighbor

gene id symbol gene type direction distance location
LOC110499879 snd1 coding upstream 358705 17344431 ~ 17655507 (+)
LOC110501011 LOC105020379 coding upstream 694221 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 766920 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 950832 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 1040434 16914013 ~ 16973778 (+)
LOC110499878 LOC106576496 coding downstream 130080 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 170893 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 228641 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 232675 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 256334 18270787 ~ 18290199 (+)
G1712961 NA non-coding upstream 365 18013641 ~ 18013847 (+)
G1712956 NA non-coding upstream 5081 18008733 ~ 18009131 (+)
G1712947 NA non-coding upstream 10933 18002882 ~ 18003279 (+)
G1712885 NA non-coding upstream 20371 17990257 ~ 17993841 (+)
G1712872 NA non-coding upstream 56199 17955984 ~ 17958013 (+)
G1712963 NA non-coding downstream 62 18014515 ~ 18015348 (+)
G1712984 NA non-coding downstream 21456 18035909 ~ 18036132 (+)
G1713011 NA non-coding downstream 43745 18058198 ~ 18058491 (+)
G1713043 NA non-coding downstream 65019 18079472 ~ 18079743 (+)
G1713044 NA non-coding downstream 65622 18080075 ~ 18083417 (+)
G1712658 NA other upstream 345626 17666280 ~ 17668586 (+)
LOC110499863 tap26 other upstream 1272994 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1293660 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1485396 16318043 ~ 16528816 (+)
G1713262 NA other downstream 482694 18497147 ~ 18500874 (+)
G1713384 NA other downstream 720338 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1370519 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 2094745 20109125 ~ 20113891 (+)

Expression


Co-expression Network