G1713011


Basic Information

Item Value
gene id G1713011
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18058198 ~ 18058491 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962581
gaatgttctggaaggcttcatacttacccaatacatcgtttggtttcaagtcttgcgtctttgtattagctactgctaataacatcagctgaaatgcacccaaaatgtcctctggtccggaaaagttgcgcatcaaaacttcaaaatgacatattatatgtcgactaaacaggtcaaactaagtgcagaagcaagctttatgatgttttaaacacacaaaacaaacttcaattcaatcggtcATCGTCtgtccttctcttgagtgctggaacaaaggaatggctgggaccaatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962581 True 294 lncRNA 0.39 1 18058198 18058491

Neighbor

gene id symbol gene type direction distance location
LOC110499879 snd1 coding upstream 402691 17344431 ~ 17655507 (+)
LOC110501011 LOC105020379 coding upstream 738207 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 810906 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 994818 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 1084420 16914013 ~ 16973778 (+)
LOC110499878 LOC106576496 coding downstream 86042 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 126855 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 184603 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 188637 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 212296 18270787 ~ 18290199 (+)
G1712984 NA non-coding upstream 22066 18035909 ~ 18036132 (+)
G1712963 NA non-coding upstream 42850 18014515 ~ 18015348 (+)
G1712962 NA non-coding upstream 43745 18014212 ~ 18014453 (+)
G1712961 NA non-coding upstream 44351 18013641 ~ 18013847 (+)
G1712956 NA non-coding upstream 49067 18008733 ~ 18009131 (+)
G1713043 NA non-coding downstream 20981 18079472 ~ 18079743 (+)
G1713044 NA non-coding downstream 21584 18080075 ~ 18083417 (+)
G1713050 NA non-coding downstream 28090 18086581 ~ 18086905 (+)
G1713051 NA non-coding downstream 28502 18086993 ~ 18088833 (+)
G1713058 NA non-coding downstream 36908 18095399 ~ 18095623 (+)
G1712658 NA other upstream 389612 17666280 ~ 17668586 (+)
LOC110499863 tap26 other upstream 1316980 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1337646 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1529382 16318043 ~ 16528816 (+)
G1713262 NA other downstream 438656 18497147 ~ 18500874 (+)
G1713384 NA other downstream 676300 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1326481 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 2050707 20109125 ~ 20113891 (+)

Expression


Co-expression Network