G1713051


Basic Information

Item Value
gene id G1713051
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18086993 ~ 18088833 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962629
aataaatggaagagtcaaacatgtggtttccatacgtTTAACGTGTTTCACTCCGTTCCATCAAgtgcattccagccattacaatgagcccatcctcctatagctcatcccaccagcctcctctgtcgtATACGCTATACCTATGAGTTCCTTTCAAATATTCAGTACGtttggtatttattaggatccccattagccgctgcaaaagcatcagctactcttcttggggtccacatgaaacatgacaaaATACATAACAAAATACAGAACATTATTAGTCAAAGACTGAAATACGTACATTTAAAACATCCCACCTAACCTATATATCAGAATATACACACATCAGATGCTAAAAATTAATAATATCTGGAAGAGAATGTGTGCCGTCTGAGGGTTACACAAGCTTGGTATTCATCCAAATCCAT
>TU1962628
TGGAAAGGTGAAATGTAGATGGATGTCAGACAGTAATTGTTGGGGTTTTGGTTGATGAGAAAGCAAGAAAGCTGAGGAAGCTGACGCCTTTGATTCCTACTGTAGATGTAAGTTTCACTTGATCTTCATTCATGATAGTAGGGAACATGTTTATTTGGAGCAAGGAACACATTCAATCAAACCTGCCCTGCGGAAAGTAGGACATGACCCCTGTGCTGCCATATCCTGTATTTTCACTGACAATAAAGTTGTGCTGAATGTAGTCGATTTTTCATTTAATGGAATTATACTCTTTCATTTCACCCCCCAAAATGGTCTAAATAATCAAATAATATATTGTGTTTAATACTGAAGTGATTACTCTTTCCAGAAAGCTATTTGATTGAATTCCATCGCGAATCTCCCTACAGATGACCATTCAGCAAGTATTCCATTCCGTCGTTCTGGAGTCAGTGTATCAGAATGAACACAGTCCAGTTGATCTTCATAGACAACCCATCAAGTCCCAGACAACTCCACTCGTCTTGCCCTGTGGCTGAGCAAAACTAACCGTACTACAAGTCTAATGACCTGAATGTGTTCTTCAGAGAGCTCTGCTGCATCCTTAAATTAAATTGAGCTAACGCGTCTCTGACCTTCATATGGGGTCCGGCAGTCCCTGTGAATTAGGGACGCCCCAAACGCCGCCCACCATTTATGTGTCACACCGTAGCCCTGGGAAATGGAGCAGCGCCTTCTCCATGTCATCAGGCGGGGACGCGGGGTGGTGGATGCACTTTGCCTTCCTCGTCCGCCGTCCATGTTGTAAGGGATCTTGTGAAGTTGGTAAGTCAATGTGAATGTTGGGCTGAGCCGTTTGAATGTAAACAGGTCTCATATGCTAGGATGGATCCAGCGACACATGTTGAATATCTGTGGCTCAGAGTTGTATTGaagtagagactcaataaaagtGTTGAAGAAATGAATAGTCTGTTGGAACTGTTGGATGTCTTCCAAAATGTAAAATGGTTGCCGTTAACGACTGTGTATTTGTTTGAAGGATATGCCAACTTCACTCTCTATGTACTTCCATTGACTGCATTAAACTTCTT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962629 False 425 lncRNA 0.39 1 18086993 18087417
TU1962628 True 1094 lncRNA 0.43 1 18087740 18088833

Neighbor

gene id symbol gene type direction distance location
LOC110499879 snd1 coding upstream 431486 17344431 ~ 17655507 (+)
LOC110501011 LOC105020379 coding upstream 767002 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 839701 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 1023613 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 1113215 16914013 ~ 16973778 (+)
LOC110499878 LOC106576496 coding downstream 55700 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 96513 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 154261 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 158295 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 181954 18270787 ~ 18290199 (+)
G1713050 NA non-coding upstream 88 18086581 ~ 18086905 (+)
G1713044 NA non-coding upstream 3576 18080075 ~ 18083417 (+)
G1713043 NA non-coding upstream 7250 18079472 ~ 18079743 (+)
G1713011 NA non-coding upstream 28502 18058198 ~ 18058491 (+)
G1712984 NA non-coding upstream 50861 18035909 ~ 18036132 (+)
G1713058 NA non-coding downstream 6566 18095399 ~ 18095623 (+)
G1713066 NA non-coding downstream 10808 18099641 ~ 18099877 (+)
G1713068 NA non-coding downstream 12195 18101028 ~ 18101259 (+)
G1713081 NA non-coding downstream 25421 18114254 ~ 18114555 (+)
G1713097 NA non-coding downstream 36674 18125507 ~ 18125822 (+)
G1712658 NA other upstream 418407 17666280 ~ 17668586 (+)
LOC110499863 tap26 other upstream 1345775 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1366441 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1558177 16318043 ~ 16528816 (+)
G1713262 NA other downstream 408314 18497147 ~ 18500874 (+)
G1713384 NA other downstream 645958 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1296139 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 2020365 20109125 ~ 20113891 (+)

Expression


Co-expression Network