G1713058


Basic Information

Item Value
gene id G1713058
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18095399 ~ 18095623 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962636
TATTTTCCAAAGGTACTgtacagccatgttatttttattcATTATATTTGTATTCGTTATTTGCAGCGTATTTATTTGTATTGTCActgtttctatttttattttaacttCTTGTTCTTTAAATTTGCATTGTTGGAAAATAACccctaagtaagcattttactgtcgTCTACAAAGTCTGtgacaaaatttgatttgaattgaaacTCAAATTGCTCTCCCCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962636 True 225 lncRNA 0.30 1 18095399 18095623

Neighbor

gene id symbol gene type direction distance location
LOC110499879 snd1 coding upstream 439892 17344431 ~ 17655507 (+)
LOC110501011 LOC105020379 coding upstream 775408 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 848107 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 1032019 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 1121621 16914013 ~ 16973778 (+)
LOC110499878 LOC106576496 coding downstream 48910 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 89723 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 147471 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 151505 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 175164 18270787 ~ 18290199 (+)
G1713051 NA non-coding upstream 6566 18086993 ~ 18088833 (+)
G1713050 NA non-coding upstream 8494 18086581 ~ 18086905 (+)
G1713044 NA non-coding upstream 11982 18080075 ~ 18083417 (+)
G1713043 NA non-coding upstream 15656 18079472 ~ 18079743 (+)
G1713011 NA non-coding upstream 36908 18058198 ~ 18058491 (+)
G1713066 NA non-coding downstream 4018 18099641 ~ 18099877 (+)
G1713068 NA non-coding downstream 5405 18101028 ~ 18101259 (+)
G1713081 NA non-coding downstream 18631 18114254 ~ 18114555 (+)
G1713097 NA non-coding downstream 29884 18125507 ~ 18125822 (+)
G1713099 NA non-coding downstream 32761 18128384 ~ 18128597 (+)
G1712658 NA other upstream 426813 17666280 ~ 17668586 (+)
LOC110499863 tap26 other upstream 1354181 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1374847 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1566583 16318043 ~ 16528816 (+)
G1713262 NA other downstream 401524 18497147 ~ 18500874 (+)
G1713384 NA other downstream 639168 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1289349 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 2013575 20109125 ~ 20113891 (+)

Expression


Co-expression Network