G1713097


Basic Information

Item Value
gene id G1713097
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18125507 ~ 18125822 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962678
GTTCATAAACGTCACAAAGACGATGCGTGCTCATCGATGGGGCAGATGTCCGTGTGTTATGATTCTGGAaggtcagatagctagcaacaatgacaagaagctgccatgtggggaatcgtaggcTCATTGTACATATTGTTATCAATAtgttgttttgaggtgttttgactctTGTCTATGCGAATAATGGCTAAAattgactagctagctaaccaaaactgtaacgatgtatttgagGGACAACAAGTACTCATGTGGtggatgaatcagaattagttgggtaacataagTAATGAAGATGTCTTATCTGCATAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962678 True 316 lncRNA 0.40 1 18125507 18125822

Neighbor

gene id symbol gene type direction distance location
LOC110499879 snd1 coding upstream 470000 17344431 ~ 17655507 (+)
LOC110501011 LOC105020379 coding upstream 805516 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 878215 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 1062127 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 1151729 16914013 ~ 16973778 (+)
LOC110499878 LOC106576496 coding downstream 18711 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 59524 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 117272 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 121306 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 144965 18270787 ~ 18290199 (+)
G1713081 NA non-coding upstream 10952 18114254 ~ 18114555 (+)
G1713068 NA non-coding upstream 24248 18101028 ~ 18101259 (+)
G1713066 NA non-coding upstream 25630 18099641 ~ 18099877 (+)
G1713058 NA non-coding upstream 29884 18095399 ~ 18095623 (+)
G1713051 NA non-coding upstream 36674 18086993 ~ 18088833 (+)
G1713099 NA non-coding downstream 2562 18128384 ~ 18128597 (+)
G1713114 NA non-coding downstream 15397 18141219 ~ 18141487 (+)
G1713118 NA non-coding downstream 20688 18146510 ~ 18147422 (+)
G1713144 LOC105020386 non-coding downstream 98187 18224009 ~ 18232407 (+)
G1712658 NA other upstream 456921 17666280 ~ 17668586 (+)
LOC110499863 tap26 other upstream 1384289 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1404955 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1596691 16318043 ~ 16528816 (+)
G1713262 NA other downstream 371325 18497147 ~ 18500874 (+)
G1713384 NA other downstream 608969 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1259150 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1983376 20109125 ~ 20113891 (+)

Expression


Co-expression Network