G1713114


Basic Information

Item Value
gene id G1713114
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18141219 ~ 18141487 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962697
cacacgcacacacatgcacacacatgcacacacacacacgcacacaccccttACCCTtctagacaacaacaacagataacataaaaacagactTCAGGCCTACTTCAACAGCATCAAAACACTACTGGAATAGTTCCGTGACAAAACCATATGTTATCCTGTGTTCTAATAAAAGGAACAGAAGGAAGGGGCAGTGGAGCTATAGATGGCACAGCTAATATGGACCGTTTGACTCTATTGTTTCCTTCAAACAAAGCAACTTTATGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962697 True 269 lncRNA 0.42 1 18141219 18141487

Neighbor

gene id symbol gene type direction distance location
LOC110499879 snd1 coding upstream 485712 17344431 ~ 17655507 (+)
LOC110501011 LOC105020379 coding upstream 821228 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 893927 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 1077839 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 1167441 16914013 ~ 16973778 (+)
LOC110499878 LOC106576496 coding downstream 3046 18144533 ~ 18203141 (+)
LOC118942894 NA coding downstream 43859 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 101607 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 105641 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 129300 18270787 ~ 18290199 (+)
G1713099 NA non-coding upstream 12622 18128384 ~ 18128597 (+)
G1713097 NA non-coding upstream 15397 18125507 ~ 18125822 (+)
G1713081 NA non-coding upstream 26664 18114254 ~ 18114555 (+)
G1713068 NA non-coding upstream 39960 18101028 ~ 18101259 (+)
G1713066 NA non-coding upstream 41342 18099641 ~ 18099877 (+)
G1713118 NA non-coding downstream 5023 18146510 ~ 18147422 (+)
G1713144 LOC105020386 non-coding downstream 82522 18224009 ~ 18232407 (+)
G1713183 NA non-coding downstream 174299 18315786 ~ 18318199 (+)
G1713196 NA non-coding downstream 196307 18337794 ~ 18338056 (+)
G1712658 NA other upstream 472633 17666280 ~ 17668586 (+)
LOC110499863 tap26 other upstream 1400001 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1420667 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1612403 16318043 ~ 16528816 (+)
G1713262 NA other downstream 355660 18497147 ~ 18500874 (+)
G1713384 NA other downstream 593304 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1243485 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1967711 20109125 ~ 20113891 (+)

Expression


Co-expression Network