G1713118


Basic Information

Item Value
gene id G1713118
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18146510 ~ 18147422 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962701
CTTTAGTATGGACCCCCAtgttttacatcaacaacaaccgaCCTGCCAGACTTTAGTATGGACCCCCTtgttttacatcaacaacaaccgaCCTGCCAGACTTTAGTATGGACCCCCTtgttttacatcaacaacatccgACCTGCCAGACTTTAGTATGGACCCCCTtgttttacatcaacaacatccgACCTGCCAGACTTTAGTATGGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962701 True 214 lncRNA 0.46 2 18146510 18147422

Neighbor

gene id symbol gene type direction distance location
LOC110499879 snd1 coding upstream 491003 17344431 ~ 17655507 (+)
LOC110501011 LOC105020379 coding upstream 826519 17272005 ~ 17319991 (+)
LOC110499865 LOC106576572 coding upstream 899218 17088969 ~ 17247292 (+)
LOC110516649 LOC106609628 coding upstream 1083130 17002417 ~ 17063380 (+)
LOC110501009 LOC105020375 coding upstream 1172732 16914013 ~ 16973778 (+)
LOC118942894 NA coding downstream 37924 18185346 ~ 18186325 (+)
LOC110499885 NA coding downstream 95672 18243094 ~ 18244775 (+)
si:dkey-159a18.1 LOC106609576 coding downstream 99706 18247128 ~ 18268691 (+)
LOC110499882 LOC106576502 coding downstream 123365 18270787 ~ 18290199 (+)
LOC110499881 LOC106576460 coding downstream 218845 18366267 ~ 18374630 (+)
G1713114 NA non-coding upstream 5023 18141219 ~ 18141487 (+)
G1713099 NA non-coding upstream 17913 18128384 ~ 18128597 (+)
G1713097 NA non-coding upstream 20688 18125507 ~ 18125822 (+)
G1713081 NA non-coding upstream 31955 18114254 ~ 18114555 (+)
G1713068 NA non-coding upstream 45251 18101028 ~ 18101259 (+)
G1713144 LOC105020386 non-coding downstream 76587 18224009 ~ 18232407 (+)
G1713183 NA non-coding downstream 168364 18315786 ~ 18318199 (+)
G1713196 NA non-coding downstream 190372 18337794 ~ 18338056 (+)
G1713197 NA non-coding downstream 191611 18339033 ~ 18339248 (+)
G1712658 NA other upstream 477924 17666280 ~ 17668586 (+)
LOC110499863 tap26 other upstream 1405292 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1425958 16719920 ~ 16720552 (+)
LOC110499847 LOC106609634 other upstream 1617694 16318043 ~ 16528816 (+)
G1713262 NA other downstream 349725 18497147 ~ 18500874 (+)
G1713384 NA other downstream 587369 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1237550 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1961776 20109125 ~ 20113891 (+)

Expression


Co-expression Network