Gene
RNA
| Item | Value |
|---|---|
| gene id | G1713503 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 18282526 ~ 18283752 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: protein FAM3C-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1963140 | True | 581 | lncRNA | 0.45 | 2 | 18282526 | 18283752 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499883 | LOC106576497 | coding | downstream | 50337 | 18203539 ~ 18232189 (-) |
| LOC110499880 | LOC106576467 | coding | downstream | 148175 | 18130099 ~ 18134351 (-) |
| LOC110499875 | LOC106576481 | coding | downstream | 801140 | 17476135 ~ 17481386 (-) |
| LOC110518924 | LOC106576509 | coding | downstream | 956665 | 17322647 ~ 17325861 (-) |
| LOC110499869 | NA | coding | downstream | 1094570 | 17181446 ~ 17187956 (-) |
| LOC110499895 | LOC106609039 | coding | upstream | 370283 | 18654035 ~ 18657692 (-) |
| LOC110499898 | scyl2 | coding | upstream | 399639 | 18683391 ~ 18701775 (-) |
| LOC110500916 | LOC106609043 | coding | upstream | 418162 | 18701914 ~ 18707657 (-) |
| LOC110501015 | LOC106609565 | coding | upstream | 579791 | 18863543 ~ 19171552 (-) |
| LOC110501016 | LOC106609564 | coding | upstream | 890341 | 19174093 ~ 19221344 (-) |
| G1713448 | NA | non-coding | downstream | 129960 | 18152184 ~ 18152566 (-) |
| G1713104 | NA | non-coding | downstream | 152805 | 18129561 ~ 18129721 (-) |
| G1713085 | NA | non-coding | downstream | 164393 | 18117933 ~ 18118133 (-) |
| G1713075 | NA | non-coding | downstream | 174837 | 18107423 ~ 18107689 (-) |
| G1713504 | NA | non-coding | upstream | 36 | 18283788 ~ 18285618 (-) |
| G1713525 | NA | non-coding | upstream | 31956 | 18315708 ~ 18318133 (-) |
| G1713540 | NA | non-coding | upstream | 66522 | 18350274 ~ 18350487 (-) |
| G1713544 | NA | non-coding | upstream | 71181 | 18354933 ~ 18355836 (-) |
| G1713550 | NA | non-coding | upstream | 81627 | 18365379 ~ 18365670 (-) |
| G1712424 | NA | other | downstream | 986791 | 17295519 ~ 17295735 (-) |
| G1712050 | NA | other | downstream | 1278826 | 17002614 ~ 17003700 (-) |
| LOC118942893 | LOC105020372 | other | downstream | 1505522 | 16758800 ~ 16777177 (-) |
| G1711947 | LOC106609625 | other | downstream | 1536662 | 16742840 ~ 16745864 (-) |
| LOC110501003 | LOC106576525 | other | downstream | 1558257 | 16719898 ~ 16740303 (-) |
| G1713604 | NA | other | upstream | 186761 | 18470513 ~ 18470817 (-) |
| G1713637 | NA | other | upstream | 310852 | 18519287 ~ 18605517 (-) |
| G1713719 | NA | other | upstream | 385082 | 18668834 ~ 18669325 (-) |
| G1713755 | NA | other | upstream | 481708 | 18765460 ~ 18766379 (-) |
| G1714475 | NA | other | upstream | 1167448 | 19400335 ~ 19453678 (-) |
