G1713183


Basic Information

Item Value
gene id G1713183
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18315786 ~ 18318199 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962773
ttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtctttgtgtagtgttcaccagataggctgtattaggtttcacgttccgtttgttgttttcgtattcgtttagttatttcatgtatcgtcaattattgattaaagaacatgagtaatcaccacgctgcatttcggtcctctctctcaacaaacgaagaacgccgttacaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962773 True 216 lncRNA 0.41 2 18315786 18318199

Neighbor

gene id symbol gene type direction distance location
LOC110499882 LOC106576502 coding upstream 25587 18270787 ~ 18290199 (+)
si:dkey-159a18.1 LOC106609576 coding upstream 47095 18247128 ~ 18268691 (+)
LOC110499885 NA coding upstream 71011 18243094 ~ 18244775 (+)
LOC110499878 LOC106576496 coding upstream 112645 18144533 ~ 18203141 (+)
LOC118942894 NA coding upstream 129461 18185346 ~ 18186325 (+)
LOC110499881 LOC106576460 coding downstream 48068 18366267 ~ 18374630 (+)
LOC110499888 LOC106609036 coding downstream 193476 18511675 ~ 18516033 (+)
LOC100301653 LOC100301653 coding downstream 249669 18567868 ~ 18596759 (+)
LOC110499892 lum coding downstream 295484 18613683 ~ 18617804 (+)
LOC110499893 LOC106576462 coding downstream 302978 18621177 ~ 18628411 (+)
G1713144 LOC105020386 non-coding upstream 83379 18224009 ~ 18232407 (+)
G1713118 NA non-coding upstream 168364 18146510 ~ 18147422 (+)
G1713114 NA non-coding upstream 174299 18141219 ~ 18141487 (+)
G1713099 NA non-coding upstream 187189 18128384 ~ 18128597 (+)
G1713196 NA non-coding downstream 19595 18337794 ~ 18338056 (+)
G1713197 NA non-coding downstream 20834 18339033 ~ 18339248 (+)
G1713202 NA non-coding downstream 32838 18351037 ~ 18351273 (+)
G1713203 NA non-coding downstream 33986 18352185 ~ 18352390 (+)
G1713187 NA non-coding downstream 69550 18387749 ~ 18388238 (+)
G1712658 NA other upstream 647200 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1371997 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1574568 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1595234 16719920 ~ 16720552 (+)
G1713262 NA other downstream 178948 18497147 ~ 18500874 (+)
G1713384 NA other downstream 416592 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1066773 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1790999 20109125 ~ 20113891 (+)
G1715392 NA other downstream 2240223 20558422 ~ 20558751 (+)

Expression


Co-expression Network