G1713196


Basic Information

Item Value
gene id G1713196
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18337794 ~ 18338056 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962787
atgtaaagTTTTGGGCGACCTAACCAAATTCGCATAGAAGTgttagttatagatctgtcattctcattaaaACCAGGTCTAAGAAGCTGtaaatctgttctatgtgcactatttctatgcttcccattcttaagtttagtttttgcctCTTTtacggttttgtacaccagcttccaacagctgaaaatacaatgtttttggtTGTGGAAAATATGTTTCACAGTGTTTTAGATGGTACaaagattctctacactatacttgct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962787 True 263 lncRNA 0.35 1 18337794 18338056

Neighbor

gene id symbol gene type direction distance location
LOC110499882 LOC106576502 coding upstream 47595 18270787 ~ 18290199 (+)
si:dkey-159a18.1 LOC106609576 coding upstream 69103 18247128 ~ 18268691 (+)
LOC110499885 NA coding upstream 93019 18243094 ~ 18244775 (+)
LOC110499878 LOC106576496 coding upstream 134653 18144533 ~ 18203141 (+)
LOC110499881 LOC106576460 coding downstream 28211 18366267 ~ 18374630 (+)
LOC110499888 LOC106609036 coding downstream 173619 18511675 ~ 18516033 (+)
LOC100301653 LOC100301653 coding downstream 229812 18567868 ~ 18596759 (+)
LOC110499892 lum coding downstream 275627 18613683 ~ 18617804 (+)
LOC110499893 LOC106576462 coding downstream 283121 18621177 ~ 18628411 (+)
G1713183 NA non-coding upstream 19595 18315786 ~ 18318199 (+)
G1713144 LOC105020386 non-coding upstream 105387 18224009 ~ 18232407 (+)
G1713118 NA non-coding upstream 190372 18146510 ~ 18147422 (+)
G1713114 NA non-coding upstream 196307 18141219 ~ 18141487 (+)
G1713197 NA non-coding downstream 977 18339033 ~ 18339248 (+)
G1713202 NA non-coding downstream 12981 18351037 ~ 18351273 (+)
G1713203 NA non-coding downstream 14129 18352185 ~ 18352390 (+)
G1713187 NA non-coding downstream 49693 18387749 ~ 18388238 (+)
G1713189 NA non-coding downstream 51303 18389359 ~ 18389728 (+)
G1712658 NA other upstream 669208 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1394005 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1596576 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1617242 16719920 ~ 16720552 (+)
G1713262 NA other downstream 159091 18497147 ~ 18500874 (+)
G1713384 NA other downstream 396735 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1046916 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1771142 20109125 ~ 20113891 (+)
G1715392 NA other downstream 2220366 20558422 ~ 20558751 (+)

Expression


Co-expression Network