Gene
RNA
| Item | Value |
|---|---|
| gene id | G1713540 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 18350274 ~ 18350487 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1963178 | True | 214 | lncRNA | 0.40 | 1 | 18350274 | 18350487 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499883 | LOC106576497 | coding | downstream | 118085 | 18203539 ~ 18232189 (-) |
| LOC110499880 | LOC106576467 | coding | downstream | 215923 | 18130099 ~ 18134351 (-) |
| LOC110499875 | LOC106576481 | coding | downstream | 868888 | 17476135 ~ 17481386 (-) |
| LOC110518924 | LOC106576509 | coding | downstream | 1024413 | 17322647 ~ 17325861 (-) |
| LOC110499869 | NA | coding | downstream | 1162318 | 17181446 ~ 17187956 (-) |
| LOC110499895 | LOC106609039 | coding | upstream | 303548 | 18654035 ~ 18657692 (-) |
| LOC110499898 | scyl2 | coding | upstream | 332904 | 18683391 ~ 18701775 (-) |
| LOC110500916 | LOC106609043 | coding | upstream | 351427 | 18701914 ~ 18707657 (-) |
| LOC110501015 | LOC106609565 | coding | upstream | 513056 | 18863543 ~ 19171552 (-) |
| LOC110501016 | LOC106609564 | coding | upstream | 823606 | 19174093 ~ 19221344 (-) |
| G1713525 | NA | non-coding | downstream | 32141 | 18315708 ~ 18318133 (-) |
| G1713504 | NA | non-coding | downstream | 64656 | 18283788 ~ 18285618 (-) |
| G1713503 | NA | non-coding | downstream | 66522 | 18282526 ~ 18283752 (-) |
| G1713448 | NA | non-coding | downstream | 197708 | 18152184 ~ 18152566 (-) |
| G1713544 | NA | non-coding | upstream | 4446 | 18354933 ~ 18355836 (-) |
| G1713550 | NA | non-coding | upstream | 14892 | 18365379 ~ 18365670 (-) |
| G1713551 | NA | non-coding | upstream | 25170 | 18375657 ~ 18376050 (-) |
| G1713552 | NA | non-coding | upstream | 25743 | 18376230 ~ 18377102 (-) |
| G1713553 | NA | non-coding | upstream | 27835 | 18378322 ~ 18383234 (-) |
| G1712424 | NA | other | downstream | 1054539 | 17295519 ~ 17295735 (-) |
| G1712050 | NA | other | downstream | 1346574 | 17002614 ~ 17003700 (-) |
| LOC118942893 | LOC105020372 | other | downstream | 1573270 | 16758800 ~ 16777177 (-) |
| G1711947 | LOC106609625 | other | downstream | 1604410 | 16742840 ~ 16745864 (-) |
| LOC110501003 | LOC106576525 | other | downstream | 1626005 | 16719898 ~ 16740303 (-) |
| G1713604 | NA | other | upstream | 120026 | 18470513 ~ 18470817 (-) |
| G1713637 | NA | other | upstream | 244117 | 18519287 ~ 18605517 (-) |
| G1713719 | NA | other | upstream | 318347 | 18668834 ~ 18669325 (-) |
| G1713755 | NA | other | upstream | 414973 | 18765460 ~ 18766379 (-) |
| G1714475 | NA | other | upstream | 1100713 | 19400335 ~ 19453678 (-) |
