G1713202


Basic Information

Item Value
gene id G1713202
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18351037 ~ 18351273 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962794
GGTCATTCCTGCCACGTAACACGCCAGTAATGCTTCACACTTATTGCTCTTCTGCCACCAGGGTTCTGAGAGACTGGAGAAACTACAGCTCATCGCCCTACACACAACCCACCTCTttacatgcatgtacacacacacatgtgcacacacaatcTTAACCTCACCCACGCCCTACCCCCATCCCTCACCAGATCTTGTTATGCAGCCTTCGGTTGAACATGTCTTGACAAATCTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962794 True 237 lncRNA 0.50 1 18351037 18351273

Neighbor

gene id symbol gene type direction distance location
LOC110499882 LOC106576502 coding upstream 60838 18270787 ~ 18290199 (+)
si:dkey-159a18.1 LOC106609576 coding upstream 82346 18247128 ~ 18268691 (+)
LOC110499885 NA coding upstream 106262 18243094 ~ 18244775 (+)
LOC110499878 LOC106576496 coding upstream 147896 18144533 ~ 18203141 (+)
LOC110499881 LOC106576460 coding downstream 14994 18366267 ~ 18374630 (+)
LOC110499888 LOC106609036 coding downstream 160402 18511675 ~ 18516033 (+)
LOC100301653 LOC100301653 coding downstream 216595 18567868 ~ 18596759 (+)
LOC110499892 lum coding downstream 262410 18613683 ~ 18617804 (+)
LOC110499893 LOC106576462 coding downstream 269904 18621177 ~ 18628411 (+)
G1713197 NA non-coding upstream 11789 18339033 ~ 18339248 (+)
G1713196 NA non-coding upstream 12981 18337794 ~ 18338056 (+)
G1713183 NA non-coding upstream 32838 18315786 ~ 18318199 (+)
G1713144 LOC105020386 non-coding upstream 118630 18224009 ~ 18232407 (+)
G1713203 NA non-coding downstream 912 18352185 ~ 18352390 (+)
G1713187 NA non-coding downstream 36476 18387749 ~ 18388238 (+)
G1713189 NA non-coding downstream 38086 18389359 ~ 18389728 (+)
G1713224 NA non-coding downstream 65639 18416912 ~ 18417385 (+)
G1713226 NA non-coding downstream 71816 18423089 ~ 18423779 (+)
G1712658 NA other upstream 682451 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1407248 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1609819 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1630485 16719920 ~ 16720552 (+)
G1713262 NA other downstream 145874 18497147 ~ 18500874 (+)
G1713384 NA other downstream 383518 18734791 ~ 18737436 (+)
G1714090 NA other downstream 1033699 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1757925 20109125 ~ 20113891 (+)
G1715392 NA other downstream 2207149 20558422 ~ 20558751 (+)

Expression


Co-expression Network