G1713544


Basic Information

Item Value
gene id G1713544
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18354933 ~ 18355836 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1963183
gtatagtgtaattgatgactatatagacatgtatagtgtaattgatgactatattgacatgtatagtgtaattgttgactatatagacatgtatagtgtaattgatgactatatagacatgtatagtgttTGATATTTACTTTAAAAGCTCTAACAAAGGCCAAGAGAACAAGAAACACTTTTTCAATGACAAAACAGAACTCAcctttgggtaaaaaaaaaaataattctgttTTGAAAGATGTAGCCTACAATGCAACATTTGTGATAATTATAAGGTGCACAAAAACTGCATAGCCTACATTTGACACCACCACAGAAGCTTCGCTATTTGACATCTCCCCAATTAAGTAACCTAGTTTTGTTGTTTGGCTACATGAATAGAACAAGGGCCTATCGCTCACAGCCCACCTCTTCTAAAGCATTGGGGAAACGTGTGCGTCTAATTCTACTAGATCGGGTATTCTCAAACTAAACACTTTTAtcctcacattttcaaacagtccatttatattttccaacggggctatacatttgggtgaggtttttttctcgcctgagtagcctcgtttcactggaaaaaataaaattaaaccatctactgttcagcgaaataacaacacaatgtcaggta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1963183 True 634 lncRNA 0.35 2 18354933 18355836

Neighbor

gene id symbol gene type direction distance location
LOC110499883 LOC106576497 coding downstream 122744 18203539 ~ 18232189 (-)
LOC110499880 LOC106576467 coding downstream 220582 18130099 ~ 18134351 (-)
LOC110499875 LOC106576481 coding downstream 873547 17476135 ~ 17481386 (-)
LOC110518924 LOC106576509 coding downstream 1029072 17322647 ~ 17325861 (-)
LOC110499869 NA coding downstream 1166977 17181446 ~ 17187956 (-)
LOC110499895 LOC106609039 coding upstream 298199 18654035 ~ 18657692 (-)
LOC110499898 scyl2 coding upstream 327555 18683391 ~ 18701775 (-)
LOC110500916 LOC106609043 coding upstream 346078 18701914 ~ 18707657 (-)
LOC110501015 LOC106609565 coding upstream 507707 18863543 ~ 19171552 (-)
LOC110501016 LOC106609564 coding upstream 818257 19174093 ~ 19221344 (-)
G1713540 NA non-coding downstream 4446 18350274 ~ 18350487 (-)
G1713525 NA non-coding downstream 36800 18315708 ~ 18318133 (-)
G1713504 NA non-coding downstream 69315 18283788 ~ 18285618 (-)
G1713503 NA non-coding downstream 71181 18282526 ~ 18283752 (-)
G1713550 NA non-coding upstream 9543 18365379 ~ 18365670 (-)
G1713551 NA non-coding upstream 19821 18375657 ~ 18376050 (-)
G1713552 NA non-coding upstream 20394 18376230 ~ 18377102 (-)
G1713553 NA non-coding upstream 22486 18378322 ~ 18383234 (-)
G1713555 NA non-coding upstream 27646 18383482 ~ 18383946 (-)
G1712424 NA other downstream 1059198 17295519 ~ 17295735 (-)
G1712050 NA other downstream 1351233 17002614 ~ 17003700 (-)
LOC118942893 LOC105020372 other downstream 1577929 16758800 ~ 16777177 (-)
G1711947 LOC106609625 other downstream 1609069 16742840 ~ 16745864 (-)
LOC110501003 LOC106576525 other downstream 1630664 16719898 ~ 16740303 (-)
G1713604 NA other upstream 114677 18470513 ~ 18470817 (-)
G1713637 NA other upstream 238768 18519287 ~ 18605517 (-)
G1713719 NA other upstream 312998 18668834 ~ 18669325 (-)
G1713755 NA other upstream 409624 18765460 ~ 18766379 (-)
G1714475 NA other upstream 1095364 19400335 ~ 19453678 (-)

Expression


Co-expression Network