Gene
RNA
| Item | Value |
|---|---|
| gene id | G1713564 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 18395704 ~ 18395932 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1963204 | True | 229 | lncRNA | 0.53 | 1 | 18395704 | 18395932 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499883 | LOC106576497 | coding | downstream | 163515 | 18203539 ~ 18232189 (-) |
| LOC110499880 | LOC106576467 | coding | downstream | 261353 | 18130099 ~ 18134351 (-) |
| LOC110499875 | LOC106576481 | coding | downstream | 914318 | 17476135 ~ 17481386 (-) |
| LOC110518924 | LOC106576509 | coding | downstream | 1069843 | 17322647 ~ 17325861 (-) |
| LOC110499869 | NA | coding | downstream | 1207748 | 17181446 ~ 17187956 (-) |
| LOC110499895 | LOC106609039 | coding | upstream | 258103 | 18654035 ~ 18657692 (-) |
| LOC110499898 | scyl2 | coding | upstream | 287459 | 18683391 ~ 18701775 (-) |
| LOC110500916 | LOC106609043 | coding | upstream | 305982 | 18701914 ~ 18707657 (-) |
| LOC110501015 | LOC106609565 | coding | upstream | 467611 | 18863543 ~ 19171552 (-) |
| LOC110501016 | LOC106609564 | coding | upstream | 778161 | 19174093 ~ 19221344 (-) |
| G1713561 | NA | non-coding | downstream | 3499 | 18391868 ~ 18392205 (-) |
| G1713557 | NA | non-coding | downstream | 10966 | 18384388 ~ 18384738 (-) |
| G1713556 | NA | non-coding | downstream | 11444 | 18384017 ~ 18384260 (-) |
| G1713555 | NA | non-coding | downstream | 11758 | 18383482 ~ 18383946 (-) |
| G1713553 | NA | non-coding | downstream | 12470 | 18378322 ~ 18383234 (-) |
| G1713590 | NA | non-coding | upstream | 58692 | 18454624 ~ 18454877 (-) |
| G1713599 | NA | non-coding | upstream | 68865 | 18464797 ~ 18465274 (-) |
| G1713608 | NA | non-coding | upstream | 78396 | 18474328 ~ 18474571 (-) |
| G1713609 | NA | non-coding | upstream | 78902 | 18474834 ~ 18475062 (-) |
| G1713613 | NA | non-coding | upstream | 86440 | 18482372 ~ 18482650 (-) |
| G1712424 | NA | other | downstream | 1099969 | 17295519 ~ 17295735 (-) |
| G1712050 | NA | other | downstream | 1392004 | 17002614 ~ 17003700 (-) |
| LOC118942893 | LOC105020372 | other | downstream | 1618700 | 16758800 ~ 16777177 (-) |
| G1711947 | LOC106609625 | other | downstream | 1649840 | 16742840 ~ 16745864 (-) |
| LOC110501003 | LOC106576525 | other | downstream | 1671435 | 16719898 ~ 16740303 (-) |
| G1713604 | NA | other | upstream | 74581 | 18470513 ~ 18470817 (-) |
| G1713637 | NA | other | upstream | 198672 | 18519287 ~ 18605517 (-) |
| G1713719 | NA | other | upstream | 272902 | 18668834 ~ 18669325 (-) |
| G1713755 | NA | other | upstream | 369528 | 18765460 ~ 18766379 (-) |
| G1714475 | NA | other | upstream | 1055268 | 19400335 ~ 19453678 (-) |
