G1713245


Basic Information

Item Value
gene id G1713245
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18445827 ~ 18446125 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962838
catatgtgtacatgtgtgtgaaagagagatggCCACACATACAGCCTTCCTCTCTCCAGTTCATTCTCCTCTGGTCACGGTAAAAGGATGGCTGGTCCCATTATGTGTAGATACACGGGGGAAACTGGGGGAATCTCTACATAAATCTAGTCCCCCTCCATCTTACCCTTGGGGGAGGAATGAAGACATGTCCACAGTTAAAACCCACAGGAACAGGCTACCACATAGGTTAGGTCTACACGGCAAAACATGGGCTTTTGGAACATATAGTGCACATTGTGAAGATGTCTACAGACGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962838 True 299 lncRNA 0.47 1 18445827 18446125

Neighbor

gene id symbol gene type direction distance location
LOC110499881 LOC106576460 coding upstream 71197 18366267 ~ 18374630 (+)
LOC110499882 LOC106576502 coding upstream 155628 18270787 ~ 18290199 (+)
si:dkey-159a18.1 LOC106609576 coding upstream 177136 18247128 ~ 18268691 (+)
LOC110499885 NA coding upstream 201052 18243094 ~ 18244775 (+)
LOC118942894 NA coding upstream 259502 18185346 ~ 18186325 (+)
LOC110499888 LOC106609036 coding downstream 65550 18511675 ~ 18516033 (+)
LOC100301653 LOC100301653 coding downstream 121743 18567868 ~ 18596759 (+)
LOC110499892 lum coding downstream 167558 18613683 ~ 18617804 (+)
LOC110499893 LOC106576462 coding downstream 175052 18621177 ~ 18628411 (+)
LOC110499894 LOC106609040 coding downstream 184518 18630643 ~ 18654262 (+)
G1713226 NA non-coding upstream 22048 18423089 ~ 18423779 (+)
G1713224 NA non-coding upstream 28442 18416912 ~ 18417385 (+)
G1713189 NA non-coding upstream 56099 18389359 ~ 18389728 (+)
G1713187 NA non-coding upstream 57589 18387749 ~ 18388238 (+)
G1713203 NA non-coding upstream 93437 18352185 ~ 18352390 (+)
G1713254 NA non-coding downstream 10218 18456343 ~ 18456561 (+)
G1713255 NA non-coding downstream 11299 18457424 ~ 18457681 (+)
G1713266 NA non-coding downstream 22571 18468696 ~ 18470203 (+)
G1713267 NA non-coding downstream 24995 18471120 ~ 18471324 (+)
G1713269 NA non-coding downstream 28053 18474178 ~ 18474391 (+)
G1712658 NA other upstream 777241 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1502038 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1704609 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1725275 16719920 ~ 16720552 (+)
G1713262 NA other downstream 51022 18497147 ~ 18500874 (+)
G1713384 NA other downstream 288666 18734791 ~ 18737436 (+)
G1714090 NA other downstream 938847 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1663073 20109125 ~ 20113891 (+)
G1715392 NA other downstream 2112297 20558422 ~ 20558751 (+)

Expression


Co-expression Network