G1713254


Basic Information

Item Value
gene id G1713254
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18456343 ~ 18456561 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962847
AATCGATGGGCTTTGTTGAAGACGGCGCGCTAGCGAACGCAAATGCTAATTTGCACTGCTATTCGTGCGCTGCCATGGTTACCGGAGGGCATCTGAAGGTCACTCGTTCGCACTTCAAGGCAGAGAGATAACACATGCATACATGCAACAGACTGGAGGATGTGGgcccacctcaacaacaacaaaaaagagggGGTTGGGAAGGATAGAAAAGGAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962847 True 219 lncRNA 0.51 1 18456343 18456561

Neighbor

gene id symbol gene type direction distance location
LOC110499881 LOC106576460 coding upstream 81713 18366267 ~ 18374630 (+)
LOC110499882 LOC106576502 coding upstream 166144 18270787 ~ 18290199 (+)
si:dkey-159a18.1 LOC106609576 coding upstream 187652 18247128 ~ 18268691 (+)
LOC110499885 NA coding upstream 211568 18243094 ~ 18244775 (+)
LOC118942894 NA coding upstream 270018 18185346 ~ 18186325 (+)
LOC110499888 LOC106609036 coding downstream 55114 18511675 ~ 18516033 (+)
LOC100301653 LOC100301653 coding downstream 111307 18567868 ~ 18596759 (+)
LOC110499892 lum coding downstream 157122 18613683 ~ 18617804 (+)
LOC110499893 LOC106576462 coding downstream 164616 18621177 ~ 18628411 (+)
LOC110499894 LOC106609040 coding downstream 174082 18630643 ~ 18654262 (+)
G1713245 NA non-coding upstream 10218 18445827 ~ 18446125 (+)
G1713226 NA non-coding upstream 32564 18423089 ~ 18423779 (+)
G1713224 NA non-coding upstream 38958 18416912 ~ 18417385 (+)
G1713189 NA non-coding upstream 66615 18389359 ~ 18389728 (+)
G1713187 NA non-coding upstream 68105 18387749 ~ 18388238 (+)
G1713255 NA non-coding downstream 863 18457424 ~ 18457681 (+)
G1713266 NA non-coding downstream 12135 18468696 ~ 18470203 (+)
G1713267 NA non-coding downstream 14559 18471120 ~ 18471324 (+)
G1713269 NA non-coding downstream 17617 18474178 ~ 18474391 (+)
G1713272 NA non-coding downstream 22894 18479455 ~ 18479662 (+)
G1712658 NA other upstream 787757 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1512554 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1715125 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1735791 16719920 ~ 16720552 (+)
G1713262 NA other downstream 40586 18497147 ~ 18500874 (+)
G1713384 NA other downstream 278230 18734791 ~ 18737436 (+)
G1714090 NA other downstream 928411 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1652637 20109125 ~ 20113891 (+)
G1715392 NA other downstream 2101861 20558422 ~ 20558751 (+)

Expression


Co-expression Network