G1713274



Basic Information


Item Value
gene id G1713274
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18481059 ~ 18481378 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1962872
ATAAACGATAACGGCACCCAAAATAAGTACTGCACCTATTTCaatccaagtcaagcactggttgCGTCACTATAAGACAACGGACTGGAATTGGTTGCTGGTGTAATTCTATGCGTTCCATTCAGAGACATATTGACATTGACATGCCTTTAAAATCTGTTGTCAAAACACACTAGAGGATTTGATTGAACTAATAAAGTTCTGCAGCCTATCCTGCCATCTGTGAGTTCATTGAATTTGTTTCATTAGGAAAGGTCTGTTTTGGCACTAGGGCGTAGCTAGCTAGAGAGATTTGGGGTATTCTCAGATTTTATTCTCAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1962872 True 320 lncRNA 0.40 1 18481059 18481378
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110499881 LOC106576460 coding upstream 106429 18366267 ~ 18374630 (+)
LOC110499882 LOC106576502 coding upstream 190860 18270787 ~ 18290199 (+)
si:dkey-159a18.1 LOC106609576 coding upstream 212368 18247128 ~ 18268691 (+)
LOC110499885 NA coding upstream 236284 18243094 ~ 18244775 (+)
LOC118942894 NA coding upstream 294734 18185346 ~ 18186325 (+)
LOC110499888 LOC106609036 coding downstream 30297 18511675 ~ 18516033 (+)
LOC100301653 LOC100301653 coding downstream 86490 18567868 ~ 18596759 (+)
LOC110499892 lum coding downstream 132305 18613683 ~ 18617804 (+)
LOC110499893 LOC106576462 coding downstream 139799 18621177 ~ 18628411 (+)
LOC110499894 LOC106609040 coding downstream 149265 18630643 ~ 18654262 (+)
G1713272 NA non-coding upstream 1397 18479455 ~ 18479662 (+)
G1713269 NA non-coding upstream 6668 18474178 ~ 18474391 (+)
G1713267 NA non-coding upstream 9735 18471120 ~ 18471324 (+)
G1713266 NA non-coding upstream 10856 18468696 ~ 18470203 (+)
G1713255 NA non-coding upstream 23378 18457424 ~ 18457681 (+)
G1713281 NA non-coding downstream 5553 18486931 ~ 18487222 (+)
G1713282 NA non-coding downstream 5907 18487285 ~ 18487494 (+)
G1713285 NA non-coding downstream 10257 18491635 ~ 18492013 (+)
G1713287 NA non-coding downstream 20888 18502266 ~ 18504320 (+)
G1713233 NA non-coding downstream 36361 18517739 ~ 18518368 (+)
G1712658 NA other upstream 812473 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1537270 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1739841 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1760507 16719920 ~ 16720552 (+)
G1713262 NA other downstream 15769 18497147 ~ 18500874 (+)
G1713384 NA other downstream 253413 18734791 ~ 18737436 (+)
G1714090 NA other downstream 903594 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1627820 20109125 ~ 20113891 (+)
G1715392 NA other downstream 2077044 20558422 ~ 20558751 (+)

Expression


G1713274 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.8.
End of interactive chart.

G1713274 Expression in each Bioproject

Bar chart with 11 bars.
G1713274 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Co-expression Network