G1713281


Basic Information

Item Value
gene id G1713281
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18486931 ~ 18487222 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962879
TCTTCAGACTTCAGAGTTGGTTGAAAACCTGGACTTAATGCAATGATTTCTAACTCCTAGATACTACTAGGATAAGTGTATGTGCTGCGTCAGCTGTGAGGTGATTTGTTATGTGGTGTAATGCTTTCCGGGAAAGACACAAGCACAGAAACACCCTTGTCGGTGGGAGTTACAGCCACATTTAGAAGCATGATGGATTGCCTAATAGCTCTAGAAACAATGCAAGCCAGAGCAAAATTACCCATATCAACAACCAATACACTGTCCATCTGGCTGGGACTAACAACCAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962879 True 292 lncRNA 0.43 1 18486931 18487222

Neighbor

gene id symbol gene type direction distance location
LOC110499881 LOC106576460 coding upstream 112301 18366267 ~ 18374630 (+)
LOC110499882 LOC106576502 coding upstream 196732 18270787 ~ 18290199 (+)
si:dkey-159a18.1 LOC106609576 coding upstream 218240 18247128 ~ 18268691 (+)
LOC110499885 NA coding upstream 242156 18243094 ~ 18244775 (+)
LOC118942894 NA coding upstream 300606 18185346 ~ 18186325 (+)
LOC110499888 LOC106609036 coding downstream 24453 18511675 ~ 18516033 (+)
LOC100301653 LOC100301653 coding downstream 80646 18567868 ~ 18596759 (+)
LOC110499892 lum coding downstream 126461 18613683 ~ 18617804 (+)
LOC110499893 LOC106576462 coding downstream 133955 18621177 ~ 18628411 (+)
LOC110499894 LOC106609040 coding downstream 143421 18630643 ~ 18654262 (+)
G1713274 NA non-coding upstream 5553 18481059 ~ 18481378 (+)
G1713272 NA non-coding upstream 7269 18479455 ~ 18479662 (+)
G1713269 NA non-coding upstream 12540 18474178 ~ 18474391 (+)
G1713267 NA non-coding upstream 15607 18471120 ~ 18471324 (+)
G1713266 NA non-coding upstream 16728 18468696 ~ 18470203 (+)
G1713282 NA non-coding downstream 63 18487285 ~ 18487494 (+)
G1713285 NA non-coding downstream 4413 18491635 ~ 18492013 (+)
G1713287 NA non-coding downstream 15044 18502266 ~ 18504320 (+)
G1713233 NA non-coding downstream 30517 18517739 ~ 18518368 (+)
G1713324 NA non-coding downstream 98850 18586072 ~ 18586667 (+)
G1712658 NA other upstream 818345 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1543142 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1745713 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1766379 16719920 ~ 16720552 (+)
G1713262 NA other downstream 9925 18497147 ~ 18500874 (+)
G1713384 NA other downstream 247569 18734791 ~ 18737436 (+)
G1714090 NA other downstream 897750 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1621976 20109125 ~ 20113891 (+)
G1715392 NA other downstream 2071200 20558422 ~ 20558751 (+)

Expression


Co-expression Network