G1713282


Basic Information

Item Value
gene id G1713282
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18487285 ~ 18487494 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962880
gaatggaatagtatcaaacacatagaaaccatgggtgcttctcaatatgcatactaccatgctccacaccCTCATGCTCCAAGTGCATTCTCCGAGGATGTTCTCTTGAGGACGAGAATGTGGAGAAAGgcataaaacattacatttgagaATCACTCACactcccctctactgtattacctcatgctgctcctccccctactgtattac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962880 True 210 lncRNA 0.44 1 18487285 18487494

Neighbor

gene id symbol gene type direction distance location
LOC110499881 LOC106576460 coding upstream 112655 18366267 ~ 18374630 (+)
LOC110499882 LOC106576502 coding upstream 197086 18270787 ~ 18290199 (+)
si:dkey-159a18.1 LOC106609576 coding upstream 218594 18247128 ~ 18268691 (+)
LOC110499885 NA coding upstream 242510 18243094 ~ 18244775 (+)
LOC118942894 NA coding upstream 300960 18185346 ~ 18186325 (+)
LOC110499888 LOC106609036 coding downstream 24181 18511675 ~ 18516033 (+)
LOC100301653 LOC100301653 coding downstream 80374 18567868 ~ 18596759 (+)
LOC110499892 lum coding downstream 126189 18613683 ~ 18617804 (+)
LOC110499893 LOC106576462 coding downstream 133683 18621177 ~ 18628411 (+)
LOC110499894 LOC106609040 coding downstream 143149 18630643 ~ 18654262 (+)
G1713281 NA non-coding upstream 63 18486931 ~ 18487222 (+)
G1713274 NA non-coding upstream 5907 18481059 ~ 18481378 (+)
G1713272 NA non-coding upstream 7623 18479455 ~ 18479662 (+)
G1713269 NA non-coding upstream 12894 18474178 ~ 18474391 (+)
G1713267 NA non-coding upstream 15961 18471120 ~ 18471324 (+)
G1713285 NA non-coding downstream 4141 18491635 ~ 18492013 (+)
G1713287 NA non-coding downstream 14772 18502266 ~ 18504320 (+)
G1713233 NA non-coding downstream 30245 18517739 ~ 18518368 (+)
G1713324 NA non-coding downstream 98578 18586072 ~ 18586667 (+)
G1713332 NA non-coding downstream 124893 18612387 ~ 18612629 (+)
G1712658 NA other upstream 818699 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1543496 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1746067 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1766733 16719920 ~ 16720552 (+)
G1713262 NA other downstream 9653 18497147 ~ 18500874 (+)
G1713384 NA other downstream 247297 18734791 ~ 18737436 (+)
G1714090 NA other downstream 897478 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1621704 20109125 ~ 20113891 (+)
G1715392 NA other downstream 2070928 20558422 ~ 20558751 (+)

Expression


Co-expression Network