G1713285


Basic Information

Item Value
gene id G1713285
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18491635 ~ 18492013 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962885
tgggtggatagagggatggatggccAGGGAGCAGTTGATTGATTGGATGATGCTGTGCTGAATGCGTCACGTTGGTCTTTATGAGGTCAGTCTACCGATAACCagcagacaacacacacatacacagtctcaCAAAGGAACGTCCACATATGTTTCATTTAATGTTACGTGAGAAGTGGCCTTCCATGGGGACAATGTATTGAGGAAGATGTAGACCTTCATCAAATGAATGCTTTTTAAATCAGAATTTTTCTACAGTATTGTACTGCACTTCATTGTATAACATTGTGTAAGTTATTGAGGAGATTTTCTTGTCAATAAAGACTTCTCACAAAGAAAACCATCATGCAGCTTTGAGTGACAAGCCCTGTTTCTTCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962885 True 379 lncRNA 0.41 1 18491635 18492013

Neighbor

gene id symbol gene type direction distance location
LOC110499881 LOC106576460 coding upstream 117005 18366267 ~ 18374630 (+)
LOC110499882 LOC106576502 coding upstream 201436 18270787 ~ 18290199 (+)
si:dkey-159a18.1 LOC106609576 coding upstream 222944 18247128 ~ 18268691 (+)
LOC110499885 NA coding upstream 246860 18243094 ~ 18244775 (+)
LOC118942894 NA coding upstream 305310 18185346 ~ 18186325 (+)
LOC110499888 LOC106609036 coding downstream 19662 18511675 ~ 18516033 (+)
LOC100301653 LOC100301653 coding downstream 75855 18567868 ~ 18596759 (+)
LOC110499892 lum coding downstream 121670 18613683 ~ 18617804 (+)
LOC110499893 LOC106576462 coding downstream 129164 18621177 ~ 18628411 (+)
LOC110499894 LOC106609040 coding downstream 138630 18630643 ~ 18654262 (+)
G1713282 NA non-coding upstream 4141 18487285 ~ 18487494 (+)
G1713281 NA non-coding upstream 4413 18486931 ~ 18487222 (+)
G1713274 NA non-coding upstream 10257 18481059 ~ 18481378 (+)
G1713272 NA non-coding upstream 11973 18479455 ~ 18479662 (+)
G1713269 NA non-coding upstream 17244 18474178 ~ 18474391 (+)
G1713287 NA non-coding downstream 10253 18502266 ~ 18504320 (+)
G1713233 NA non-coding downstream 25726 18517739 ~ 18518368 (+)
G1713324 NA non-coding downstream 94059 18586072 ~ 18586667 (+)
G1713332 NA non-coding downstream 120374 18612387 ~ 18612629 (+)
G1713351 NA non-coding downstream 168342 18660355 ~ 18660684 (+)
G1712658 NA other upstream 823049 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1547846 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1750417 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1771083 16719920 ~ 16720552 (+)
G1713262 NA other downstream 5134 18497147 ~ 18500874 (+)
G1713384 NA other downstream 242778 18734791 ~ 18737436 (+)
G1714090 NA other downstream 892959 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1617185 20109125 ~ 20113891 (+)
G1715392 NA other downstream 2066409 20558422 ~ 20558751 (+)

Expression


Co-expression Network