Gene
RNA
| Item | Value |
|---|---|
| gene id | G1713624 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 18496659 ~ 18496885 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1963267 | True | 227 | lncRNA | 0.47 | 1 | 18496659 | 18496885 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499883 | LOC106576497 | coding | downstream | 264470 | 18203539 ~ 18232189 (-) |
| LOC110499880 | LOC106576467 | coding | downstream | 362308 | 18130099 ~ 18134351 (-) |
| LOC110499875 | LOC106576481 | coding | downstream | 1015273 | 17476135 ~ 17481386 (-) |
| LOC110518924 | LOC106576509 | coding | downstream | 1170798 | 17322647 ~ 17325861 (-) |
| LOC110499869 | NA | coding | downstream | 1308703 | 17181446 ~ 17187956 (-) |
| LOC110499895 | LOC106609039 | coding | upstream | 157150 | 18654035 ~ 18657692 (-) |
| LOC110499898 | scyl2 | coding | upstream | 186506 | 18683391 ~ 18701775 (-) |
| LOC110500916 | LOC106609043 | coding | upstream | 205029 | 18701914 ~ 18707657 (-) |
| LOC110501015 | LOC106609565 | coding | upstream | 366658 | 18863543 ~ 19171552 (-) |
| LOC110501016 | LOC106609564 | coding | upstream | 677208 | 19174093 ~ 19221344 (-) |
| G1713619 | NA | non-coding | downstream | 6959 | 18489445 ~ 18489700 (-) |
| G1713613 | NA | non-coding | downstream | 14009 | 18482372 ~ 18482650 (-) |
| G1713609 | NA | non-coding | downstream | 21597 | 18474834 ~ 18475062 (-) |
| G1713608 | NA | non-coding | downstream | 22088 | 18474328 ~ 18474571 (-) |
| G1713599 | NA | non-coding | downstream | 31385 | 18464797 ~ 18465274 (-) |
| G1713630 | NA | non-coding | upstream | 14116 | 18511001 ~ 18511228 (-) |
| G1713631 | NA | non-coding | upstream | 14912 | 18511797 ~ 18512041 (-) |
| G1713632 | LOC106609036 | non-coding | upstream | 15787 | 18512672 ~ 18514241 (-) |
| G1713634 | NA | non-coding | upstream | 20235 | 18517120 ~ 18518591 (-) |
| G1713637 | NA | non-coding | upstream | 22402 | 18519287 ~ 18605517 (-) |
| G1713604 | NA | other | downstream | 25842 | 18470513 ~ 18470817 (-) |
| G1712424 | NA | other | downstream | 1200924 | 17295519 ~ 17295735 (-) |
| G1712050 | NA | other | downstream | 1492959 | 17002614 ~ 17003700 (-) |
| LOC118942893 | LOC105020372 | other | downstream | 1719655 | 16758800 ~ 16777177 (-) |
| G1711947 | LOC106609625 | other | downstream | 1750795 | 16742840 ~ 16745864 (-) |
| G1713719 | NA | other | upstream | 171949 | 18668834 ~ 18669325 (-) |
| G1713755 | NA | other | upstream | 268575 | 18765460 ~ 18766379 (-) |
| G1714475 | NA | other | upstream | 954315 | 19400335 ~ 19453678 (-) |
| G1714470 | NA | other | upstream | 1107286 | 19599461 ~ 19617954 (-) |
