G1713262


Basic Information

Item Value
gene id G1713262
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18497147 ~ 18500874 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962859
acaagtaatcttgatggttgtactgTCGTCTCacataaaactgtgaaggacctcggcgttactctggaccctgatctctcttttgacgaacatatcaagaatgtttcaaggacagctgttttccatctacgaaacattgcaaaaatcagaaactttctgtccaaaaattatgcagaaaaatgaatccatgcttctGTTACTTctggttagactactgcaatgctctactttctggctacccggataaagcactaaataaacttcagttagtgctaaatacaacTCCTAGAATCCTgcctagaaccaaaacatttgattatattactccagtgctagcctccctacactggcttcctgtcaaggcaagggctgatttcaaggttttactgctaacctacaaagtattacatgggcttgctcctacctatctctctgatttggtcctgccgtacatacctacacatacgctacggtcacaagatgcaggcctcctaattgtccctagaatttctaagcaaacagctggaggcagggctttctcctatagagctccatttttatggaatggtctgcctacccatgtgagagacgcagactcagtctcaacctttaagtctttactgaagactcatctcttcagtaggtcatatgattgagtgtagtctggcccaggagtgtgaaggtgaacggaaaggctctggagcaacgaaccgcccttgctgtctctgcctggccggttcccctctctccactgggattctctgcctcttaccctattacaggggctgagtcactggcttactggtgctcttccatgcctcccctaggaggggtgcgtcacttgagtgtgttgagtcgctgacgtgatcttcctgtctgggtttggaactcccccttgggttgtgccgtgacggagatctttgtgggttatactcggccttgtctcaggatggtaagttagtggttgaagatatccctctagtggtgtgggggctgtgctttggcaaagtgggtggggttatatcctgcctgtttggccctgtctgggggtatcattggatggggccacagagtctcctgacccctcctgtctcagcctccattatttatgctgcagtagtttatgtgtcggggggctagggtcagtctgttatatctggagtacttctcctgtcttatccggtgtcctgtgtgaatttaagtatgctctctctaattctctctttctttctctctttctttctttctctctcccggaggacctgagccctaggaccatgcctcaggactacctggcatgatgactccttgctgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgcctgcggctatggaagcctgacctgttcaccggacgtgcacctgtcccagacctgctgttttcaactctctagagacagcaagagaggtagagatactcccgaggtgctgacttgttgcaccctcaacaactactatgattattattatttgaccatgctggtaacttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccacccctcatagcctggttcctctctaggtttcttcctaggtttttgcctttctagggcgtttttcctagtcaccgtgcttctacagttgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtaagaagggctatataaatacatttgatttgatttgattgatcagGGCTCCAATTTCTGCACCGCTCTGCGAAGCCACTCACCTCACCTGACCCAGCTCTCTTGGTGAAAAGCACATGACGCATATCTTCCAGGAGTAGATGTCTCACCAGAGATATCACATCTCACTGAGATCCACTGAAGTCTCACCAGAGATATCACATCTCACAGATATCCACTGAAGTCTCACCAGAGATATCACATCTTACAGAGATCCACTGGAGAAGTCTCACCAGAGATATAACATCTCACAGATCCACTGGAGAGGTCTCACCAGAGATACCAAATCTCACAGATCCACTGGAGAGGTCTCACCAGAGATACCAAATCTCACAGAGATCCACTGGAGAAGTCTCACCAGAGATATCACATCTCACAGAGATCCACTGAAGTCTCACCAGAGATATCACATCTCACAGAGATCCACTGAAGTCTCACCAGAGATATCACATCTCACAGAGATCCACTGGAGAATTCTCACCAGAGATATCACATCTCACAGATCCACTGGACGAGTCTCACCAGAGATATCACATCTCACAGAGATCCACGAGAGAAGTCTTTGGGACGTGGGTGAGAGACCAGACAACTGGCATGACTAGTGGCAATCTGCCAAGGCAACTGGGCATACTGGGGAACAATAGCAGGACTGTGGGGAAGACTAGGACAGATGTGGGAGTGGGACAGACAGTCAAATCATAAGAACAAGAGAGACACTCTCAGTGTTCAGACTCATGACAGCTGATCTGTTCAGCTACGATGTAgatagatttgtgtgtgtgaaacatCTAACCTTGagttaataaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacactctctctctgagctgtttATTGTAACTTTTCCTCATGATAATAAACAGGTGTCCTCTTAGACACTGTGCTGTGtcctactgtctctcctcctccaccactctgtctctttttactcatctaccactcaccctcacaggtctctcctcctccaccactctATCACTTTTTACTCATCTACCACTCACCCTCAcaggtctctcctcctccaccactctgtctctttttactcatctaccactcaccctcacaggtctctcctcctccaccactcgGTCACTTTTTACTCATCTACCACTCACCCTCACAGGTCCGCGACATTACGTCACCACCGCGGGGAAACAAGGAGTACAGCCAAAAGTGCCAACAACAGACGGCATTCTCTGTTATGTTGTTTGATTATGGTCCGCAcccacactcacgcacacacactcatgcacgcgcacacacacacactgtatttcaAACAGCTCGGTTATGATTTGGTTCCAGATGGTGTAATTAGTTATTCATATTTTAATGTATTCCTTGGTTTCATCTTTCAGgacatatgatatggtaaacaATCTATTAATACTCAGCAGTGATCTGTATGCTTATGTAATATTATGCAATACAGACTGTTATCAAGGCAACCTGTGGTCTCGTTTGTGGTCCTTTAGCGCCCCCACATGTTTTTTTTCTACATGCACAGCTGTGGATAAGGCCTTGTTTTTTCCATATGAAATGCTGTGTCTGATTCATTGATCATTTTCTATCTTCAGTGAAactttaaatacattttgtttggACTCTTTTTCATTGTCATATTCCATTCCCACGTGATCATCGGTCTATTATTGTAACCca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962859 True 3507 TUCP 0.46 3 18497147 18500874

Neighbor

gene id symbol gene type direction distance location
LOC110499881 LOC106576460 coding upstream 122517 18366267 ~ 18374630 (+)
LOC110499882 LOC106576502 coding upstream 206948 18270787 ~ 18290199 (+)
si:dkey-159a18.1 LOC106609576 coding upstream 228456 18247128 ~ 18268691 (+)
LOC110499885 NA coding upstream 252372 18243094 ~ 18244775 (+)
LOC110499878 LOC106576496 coding upstream 294006 18144533 ~ 18203141 (+)
LOC110499888 LOC106609036 coding downstream 10801 18511675 ~ 18516033 (+)
LOC100301653 LOC100301653 coding downstream 66994 18567868 ~ 18596759 (+)
LOC110499892 lum coding downstream 112809 18613683 ~ 18617804 (+)
LOC110499893 LOC106576462 coding downstream 120303 18621177 ~ 18628411 (+)
LOC110499894 LOC106609040 coding downstream 129769 18630643 ~ 18654262 (+)
G1713285 NA non-coding upstream 5134 18491635 ~ 18492013 (+)
G1713282 NA non-coding upstream 9653 18487285 ~ 18487494 (+)
G1713281 NA non-coding upstream 9925 18486931 ~ 18487222 (+)
G1713274 NA non-coding upstream 15769 18481059 ~ 18481378 (+)
G1713272 NA non-coding upstream 17485 18479455 ~ 18479662 (+)
G1713287 NA non-coding downstream 1392 18502266 ~ 18504320 (+)
G1713233 NA non-coding downstream 16865 18517739 ~ 18518368 (+)
G1713324 NA non-coding downstream 85198 18586072 ~ 18586667 (+)
G1713332 NA non-coding downstream 111513 18612387 ~ 18612629 (+)
G1713351 NA non-coding downstream 159481 18660355 ~ 18660684 (+)
G1712658 NA other upstream 828561 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1553358 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1755929 16740369 ~ 16742407 (+)
G1711795 NA other upstream 1776595 16719920 ~ 16720552 (+)
G1713384 NA other downstream 233917 18734791 ~ 18737436 (+)
G1714090 NA other downstream 884098 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1608324 20109125 ~ 20113891 (+)
G1715392 NA other downstream 2057548 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 2497724 20954576 ~ 21004439 (+)

Expression


Co-expression Network