G1713287


Basic Information

Item Value
gene id G1713287
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18502266 ~ 18504320 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962887
aacatactgactcaaatctctggccacataataataaaaaatgggatgtaataaatgtatcactagtgactttaaacaatgccactttatatactgtttacataccctacattactcatctcatatgtatataatgtactcTCTACTGCATCTTTCCGATGCCGCACGGCCATCCATGTATTcatcatccatatatttatatttttttctaatAATTTATTACCaaaaacacaaggaaggggtaacattaaagtattagaacatgaaggacaaacaatacagcatcaagacactatcaaacatgcATCAGTCTTTCCACAACAGATCCATCCTTGTGTGTGAGGgtgtctactactactatcaaacatgtatcagtctttccACAACAGATCCATCCTTGTGTGTGAGGgtgtctactactactatcaaacatgtatcagtctttccACAACAGATCCATCCTTGTGTGTGAGGGTGCCTACTACTactatcaaacatgtatcagtctttccACAACAGATCCATCCTTGTGTGTGAGGGTGCGTgtgcatgatagtgatataaaatGTGTCAGTTTCCTTTTTCATGATCACAATCTTGtgaaacccgaaccctccaagatccCCCCCggaataaaatataaaaatacaattattttccaTTCcacacccccaagaaccccccaatgcaccaacaaccaaggtaatgaactaaagagaagaaaggaaaagacagaagaaaacaacaatgcaccaacaaccaaggtAATGAACTAATGAGAagaaaggaaaagacagaagaaaacaacaaggcaccaacaaccaaggtaatgaactaaagagaaggaaaagacagaaaacaacaatgcaccaacaaccaaggtaatgaactaaagagaaggaaaagacagaagaaaacaacaatgcaaaaaagaaaatacaaaaaaaaatacatttataacaaaggacatcaaggacaactgaaatcataacagcaatgcctattttacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962887 True 1067 lncRNA 0.37 3 18502266 18504320

Neighbor

gene id symbol gene type direction distance location
LOC110499881 LOC106576460 coding upstream 127636 18366267 ~ 18374630 (+)
LOC110499882 LOC106576502 coding upstream 212067 18270787 ~ 18290199 (+)
si:dkey-159a18.1 LOC106609576 coding upstream 233575 18247128 ~ 18268691 (+)
LOC110499885 NA coding upstream 257491 18243094 ~ 18244775 (+)
LOC118942894 NA coding upstream 315941 18185346 ~ 18186325 (+)
LOC110499888 LOC106609036 coding downstream 7355 18511675 ~ 18516033 (+)
LOC100301653 LOC100301653 coding downstream 63548 18567868 ~ 18596759 (+)
LOC110499892 lum coding downstream 109363 18613683 ~ 18617804 (+)
LOC110499893 LOC106576462 coding downstream 116857 18621177 ~ 18628411 (+)
LOC110499894 LOC106609040 coding downstream 126323 18630643 ~ 18654262 (+)
G1713285 NA non-coding upstream 10253 18491635 ~ 18492013 (+)
G1713282 NA non-coding upstream 14772 18487285 ~ 18487494 (+)
G1713281 NA non-coding upstream 15044 18486931 ~ 18487222 (+)
G1713274 NA non-coding upstream 20888 18481059 ~ 18481378 (+)
G1713272 NA non-coding upstream 22604 18479455 ~ 18479662 (+)
G1713233 NA non-coding downstream 13419 18517739 ~ 18518368 (+)
G1713324 NA non-coding downstream 81752 18586072 ~ 18586667 (+)
G1713332 NA non-coding downstream 108067 18612387 ~ 18612629 (+)
G1713351 NA non-coding downstream 156035 18660355 ~ 18660684 (+)
G1713352 NA non-coding downstream 158852 18663172 ~ 18663507 (+)
G1713262 NA other upstream 1392 18497147 ~ 18500874 (+)
G1712658 NA other upstream 833680 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1558477 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1761048 16740369 ~ 16742407 (+)
G1713384 NA other downstream 230471 18734791 ~ 18737436 (+)
G1714090 NA other downstream 880652 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1604878 20109125 ~ 20113891 (+)
G1715392 NA other downstream 2054102 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 2494278 20954576 ~ 21004439 (+)

Expression


Co-expression Network