G1713233


Basic Information

Item Value
gene id G1713233
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18517739 ~ 18518368 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962826
GGCCTAATATGGGCAAGAAACAATGGCACAGTCTAGTAAAAATGTCTGCCTACTGCAAAATTATTCTCCAATAGCCCTTTATTAATTTCCAAAACCACCTCCAGATACTTTTCATAAGAGGGCTGGGGTAATATTTGATTGCCTATCGTTATTTAAGCTGAAATGTGTTTATCTGAACACAAGTTTATTTTATGGGTAAGAGCTTGGCCGTGCTGTACACCAAATCCTTGGCTTGGCTGCTggttattattggatagaaacaTGATTTTAAACTTTGGCAGCATTTTTTAAGGGCACCACTTGTTTTTTTCATGCCTCATAATGGCCTTTCCAGTCCAAATGTTTCCATTCTAAAGCGTTCTCTCCGCTTCCTGTAAACAAGTTAATAAGATAATTTTTTATATAATATATGTATACAGCCATGTCTGGTGATTAACTGCACCAAAATTATCAAACTTCCTGGAAGAATAACATTCAAATCAGAGTTTCTTGATTAGATAATATTTTACCCTGTAGCAATGATGGATAACTGCTGTACATTGCAAATGTATCCATGATTGGATgttgatacagtgcattcgggaaagtattcagaccccttgactttttccacattttcttacattaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962826 True 630 lncRNA 0.36 1 18517739 18518368

Neighbor

gene id symbol gene type direction distance location
LOC110499888 LOC106609036 coding upstream 1706 18511675 ~ 18516033 (+)
LOC110499881 LOC106576460 coding upstream 143109 18366267 ~ 18374630 (+)
LOC110499882 LOC106576502 coding upstream 227540 18270787 ~ 18290199 (+)
si:dkey-159a18.1 LOC106609576 coding upstream 249048 18247128 ~ 18268691 (+)
LOC110499885 NA coding upstream 272964 18243094 ~ 18244775 (+)
LOC100301653 LOC100301653 coding downstream 49500 18567868 ~ 18596759 (+)
LOC110499892 lum coding downstream 95315 18613683 ~ 18617804 (+)
LOC110499893 LOC106576462 coding downstream 102809 18621177 ~ 18628411 (+)
LOC110499894 LOC106609040 coding downstream 112275 18630643 ~ 18654262 (+)
si:ch211-244b2.3 LOC106609042 coding downstream 153545 18671875 ~ 18683306 (+)
G1713287 NA non-coding upstream 13419 18502266 ~ 18504320 (+)
G1713285 NA non-coding upstream 25726 18491635 ~ 18492013 (+)
G1713282 NA non-coding upstream 30245 18487285 ~ 18487494 (+)
G1713281 NA non-coding upstream 30517 18486931 ~ 18487222 (+)
G1713274 NA non-coding upstream 36361 18481059 ~ 18481378 (+)
G1713324 NA non-coding downstream 67704 18586072 ~ 18586667 (+)
G1713332 NA non-coding downstream 94019 18612387 ~ 18612629 (+)
G1713351 NA non-coding downstream 141987 18660355 ~ 18660684 (+)
G1713352 NA non-coding downstream 144804 18663172 ~ 18663507 (+)
G1713331 NA non-coding downstream 150603 18668971 ~ 18669328 (+)
G1713262 NA other upstream 16865 18497147 ~ 18500874 (+)
G1712658 NA other upstream 849153 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1573950 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1776521 16740369 ~ 16742407 (+)
G1713384 NA other downstream 216423 18734791 ~ 18737436 (+)
G1714090 NA other downstream 866604 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1590830 20109125 ~ 20113891 (+)
G1715392 NA other downstream 2040054 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 2480230 20954576 ~ 21004439 (+)

Expression


Co-expression Network