G1713352


Basic Information

Item Value
gene id G1713352
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18663172 ~ 18663507 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962961
gataaagcaaagcagttcgacagatacaacaacacagagttacacatggagtaaaacaaacatacagtcaataataaagtataaacaagtctatatacaatgtgagcaaatgaggtgagaagggaggtaaaggcaaaaaaaggccttggtggcaaggtaaatacaatatagcaagtaaaacactggaatggtagttttgcaatggaagaatgtgcaaagtagaaataaaaataatggggtgcaaaggagcaaaataaataaattaaatacagttgggaaagaggtagttgatagggctaaattatatgtgggctatgtacaggtgcagtaatctgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962961 True 336 lncRNA 0.35 1 18663172 18663507

Neighbor

gene id symbol gene type direction distance location
LOC110499894 LOC106609040 coding upstream 8910 18630643 ~ 18654262 (+)
LOC110499893 LOC106576462 coding upstream 34761 18621177 ~ 18628411 (+)
LOC110499892 lum coding upstream 45368 18613683 ~ 18617804 (+)
LOC100301653 LOC100301653 coding upstream 66413 18567868 ~ 18596759 (+)
LOC110499888 LOC106609036 coding upstream 147139 18511675 ~ 18516033 (+)
si:ch211-244b2.3 LOC106609042 coding downstream 8406 18671875 ~ 18683306 (+)
fut9 fut9 coding downstream 55801 18719308 ~ 18720592 (+)
LOC110499900 LOC106596632 coding downstream 63190 18726697 ~ 18734052 (+)
LOC110499901 LOC106609586 coding downstream 76879 18740386 ~ 18754645 (+)
LOC110499903 LOC106609567 coding downstream 94952 18758459 ~ 18770532 (+)
G1713351 NA non-coding upstream 2488 18660355 ~ 18660684 (+)
G1713332 NA non-coding upstream 50543 18612387 ~ 18612629 (+)
G1713324 NA non-coding upstream 76505 18586072 ~ 18586667 (+)
G1713233 NA non-coding upstream 144804 18517739 ~ 18518368 (+)
G1713287 NA non-coding upstream 158852 18502266 ~ 18504320 (+)
G1713331 NA non-coding downstream 5464 18668971 ~ 18669328 (+)
G1713343 scyl2 non-coding downstream 19901 18683408 ~ 18686424 (+)
G1713359 NA non-coding downstream 23154 18686661 ~ 18687003 (+)
G1713360 NA non-coding downstream 24268 18687775 ~ 18687995 (+)
G1713262 NA other upstream 162298 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 395664 18247128 ~ 18268691 (+)
G1712658 NA other upstream 994586 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1719383 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1921954 16740369 ~ 16742407 (+)
G1713384 NA other downstream 71284 18734791 ~ 18737436 (+)
G1714090 NA other downstream 721465 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1445691 20109125 ~ 20113891 (+)
G1715392 NA other downstream 1894915 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 2335091 20954576 ~ 21004439 (+)

Expression


Co-expression Network