G1713369


Basic Information

Item Value
gene id G1713369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 18705155 ~ 18705421 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1962979
TTAAAGCCTCCCTCTGTAGCTACTATTTCTGTTCAACAATGCAGCCCTAAACTAGTTTATTTTGGTATCGGAGAACTGCGGGCAAAGGTCTGTCAAAAGAGGGCCAGGGAAGAGGATCAGGGATTTCAGGTGCCTACCTTAAAGAGCTGAGTGTGGTTGTCCATCAGAAACATCAGCAGCCTCTCGCTCCGGGTTACGAGATAGCTCTTTATTCTGCACGATGACCTTCAGAAATGtcctgctgaccagggctctgttgtctgtctg

Function

NR:

description
DEP domain-containing protein 7-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1962979 True 267 lncRNA 0.48 1 18705155 18705421

Neighbor

gene id symbol gene type direction distance location
si:ch211-244b2.3 LOC106609042 coding upstream 21849 18671875 ~ 18683306 (+)
LOC110499894 LOC106609040 coding upstream 50893 18630643 ~ 18654262 (+)
LOC110499893 LOC106576462 coding upstream 76744 18621177 ~ 18628411 (+)
LOC110499892 lum coding upstream 87351 18613683 ~ 18617804 (+)
LOC100301653 LOC100301653 coding upstream 108396 18567868 ~ 18596759 (+)
fut9 fut9 coding downstream 13887 18719308 ~ 18720592 (+)
LOC110499900 LOC106596632 coding downstream 21276 18726697 ~ 18734052 (+)
LOC110499901 LOC106609586 coding downstream 34965 18740386 ~ 18754645 (+)
LOC110499903 LOC106609567 coding downstream 53038 18758459 ~ 18770532 (+)
LOC110499902 LOC106609566 coding downstream 64827 18770248 ~ 18840460 (+)
G1713368 NA non-coding upstream 707 18703644 ~ 18704448 (+)
G1713366 NA non-coding upstream 6018 18697279 ~ 18699137 (+)
G1713365 scyl2 non-coding upstream 9032 18695904 ~ 18696123 (+)
G1713363 NA non-coding upstream 12728 18692125 ~ 18692427 (+)
G1713362 NA non-coding upstream 13405 18691409 ~ 18691750 (+)
G1713372 NA non-coding downstream 3351 18708772 ~ 18709101 (+)
G1713379 NA non-coding downstream 18632 18724053 ~ 18724458 (+)
G1713384 NA non-coding downstream 29370 18734791 ~ 18737436 (+)
G1713385 NA non-coding downstream 32209 18737630 ~ 18738946 (+)
G1713386 NA non-coding downstream 34085 18739506 ~ 18740125 (+)
G1713262 NA other upstream 204281 18497147 ~ 18500874 (+)
si:dkey-159a18.1 LOC106609576 other upstream 437647 18247128 ~ 18268691 (+)
G1712658 NA other upstream 1036569 17666280 ~ 17668586 (+)
LOC110501009 LOC105020375 other upstream 1761366 16914013 ~ 16973778 (+)
LOC110499863 tap26 other upstream 1963937 16740369 ~ 16742407 (+)
G1714090 NA other downstream 679551 19384972 ~ 19754609 (+)
nmes1 nmes1 other downstream 1403777 20109125 ~ 20113891 (+)
G1715392 NA other downstream 1853001 20558422 ~ 20558751 (+)
LOC110499980 LOC106576426 other downstream 2293177 20954576 ~ 21004439 (+)

Expression


Co-expression Network