Gene
RNA
| Item | Value |
|---|---|
| gene id | G1713372 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 18708772 ~ 18709101 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1962982 | True | 330 | lncRNA | 0.41 | 1 | 18708772 | 18709101 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-244b2.3 | LOC106609042 | coding | upstream | 25466 | 18671875 ~ 18683306 (+) |
| LOC110499894 | LOC106609040 | coding | upstream | 54510 | 18630643 ~ 18654262 (+) |
| LOC110499893 | LOC106576462 | coding | upstream | 80361 | 18621177 ~ 18628411 (+) |
| LOC110499892 | lum | coding | upstream | 90968 | 18613683 ~ 18617804 (+) |
| LOC100301653 | LOC100301653 | coding | upstream | 112013 | 18567868 ~ 18596759 (+) |
| fut9 | fut9 | coding | downstream | 10207 | 18719308 ~ 18720592 (+) |
| LOC110499900 | LOC106596632 | coding | downstream | 17596 | 18726697 ~ 18734052 (+) |
| LOC110499901 | LOC106609586 | coding | downstream | 31285 | 18740386 ~ 18754645 (+) |
| LOC110499903 | LOC106609567 | coding | downstream | 49358 | 18758459 ~ 18770532 (+) |
| LOC110499902 | LOC106609566 | coding | downstream | 61147 | 18770248 ~ 18840460 (+) |
| G1713369 | NA | non-coding | upstream | 3351 | 18705155 ~ 18705421 (+) |
| G1713368 | NA | non-coding | upstream | 4324 | 18703644 ~ 18704448 (+) |
| G1713366 | NA | non-coding | upstream | 9635 | 18697279 ~ 18699137 (+) |
| G1713365 | scyl2 | non-coding | upstream | 12649 | 18695904 ~ 18696123 (+) |
| G1713363 | NA | non-coding | upstream | 16345 | 18692125 ~ 18692427 (+) |
| G1713379 | NA | non-coding | downstream | 14952 | 18724053 ~ 18724458 (+) |
| G1713384 | NA | non-coding | downstream | 25690 | 18734791 ~ 18737436 (+) |
| G1713385 | NA | non-coding | downstream | 28529 | 18737630 ~ 18738946 (+) |
| G1713386 | NA | non-coding | downstream | 30405 | 18739506 ~ 18740125 (+) |
| G1713421 | NA | non-coding | downstream | 115363 | 18824464 ~ 18825189 (+) |
| G1713262 | NA | other | upstream | 207898 | 18497147 ~ 18500874 (+) |
| si:dkey-159a18.1 | LOC106609576 | other | upstream | 441264 | 18247128 ~ 18268691 (+) |
| G1712658 | NA | other | upstream | 1040186 | 17666280 ~ 17668586 (+) |
| LOC110501009 | LOC105020375 | other | upstream | 1764983 | 16914013 ~ 16973778 (+) |
| LOC110499863 | tap26 | other | upstream | 1967554 | 16740369 ~ 16742407 (+) |
| G1714090 | NA | other | downstream | 675871 | 19384972 ~ 19754609 (+) |
| nmes1 | nmes1 | other | downstream | 1400097 | 20109125 ~ 20113891 (+) |
| G1715392 | NA | other | downstream | 1849321 | 20558422 ~ 20558751 (+) |
| LOC110499980 | LOC106576426 | other | downstream | 2289497 | 20954576 ~ 21004439 (+) |
