Gene
RNA
| Item | Value |
|---|---|
| gene id | G1713386 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 18739506 ~ 18740125 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1963000 | True | 620 | lncRNA | 0.33 | 1 | 18739506 | 18740125 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499900 | LOC106596632 | coding | upstream | 5454 | 18726697 ~ 18734052 (+) |
| fut9 | fut9 | coding | upstream | 18914 | 18719308 ~ 18720592 (+) |
| si:ch211-244b2.3 | LOC106609042 | coding | upstream | 56200 | 18671875 ~ 18683306 (+) |
| LOC110499894 | LOC106609040 | coding | upstream | 85244 | 18630643 ~ 18654262 (+) |
| LOC110499893 | LOC106576462 | coding | upstream | 111095 | 18621177 ~ 18628411 (+) |
| LOC110499901 | LOC106609586 | coding | downstream | 261 | 18740386 ~ 18754645 (+) |
| LOC110499903 | LOC106609567 | coding | downstream | 18334 | 18758459 ~ 18770532 (+) |
| LOC110499902 | LOC106609566 | coding | downstream | 30123 | 18770248 ~ 18840460 (+) |
| LOC110501017 | LOC106609562 | coding | downstream | 483312 | 19223437 ~ 19226634 (+) |
| LOC118942896 | NA | coding | downstream | 520620 | 19260745 ~ 19279035 (+) |
| G1713385 | NA | non-coding | upstream | 560 | 18737630 ~ 18738946 (+) |
| G1713384 | NA | non-coding | upstream | 3382 | 18734791 ~ 18737436 (+) |
| G1713379 | NA | non-coding | upstream | 15048 | 18724053 ~ 18724458 (+) |
| G1713372 | NA | non-coding | upstream | 30405 | 18708772 ~ 18709101 (+) |
| G1713369 | NA | non-coding | upstream | 34085 | 18705155 ~ 18705421 (+) |
| G1713421 | NA | non-coding | downstream | 84339 | 18824464 ~ 18825189 (+) |
| G1713808 | NA | non-coding | downstream | 115796 | 18855921 ~ 18856161 (+) |
| G1713814 | NA | non-coding | downstream | 119525 | 18859650 ~ 18859869 (+) |
| G1713818 | NA | non-coding | downstream | 122889 | 18863014 ~ 18863254 (+) |
| G1713820 | NA | non-coding | downstream | 123581 | 18863706 ~ 18866161 (+) |
| G1713262 | NA | other | upstream | 238632 | 18497147 ~ 18500874 (+) |
| si:dkey-159a18.1 | LOC106609576 | other | upstream | 471998 | 18247128 ~ 18268691 (+) |
| G1712658 | NA | other | upstream | 1070920 | 17666280 ~ 17668586 (+) |
| LOC110501009 | LOC105020375 | other | upstream | 1795717 | 16914013 ~ 16973778 (+) |
| G1714090 | NA | other | downstream | 644847 | 19384972 ~ 19754609 (+) |
| nmes1 | nmes1 | other | downstream | 1369073 | 20109125 ~ 20113891 (+) |
| G1715392 | NA | other | downstream | 1818297 | 20558422 ~ 20558751 (+) |
| LOC110499980 | LOC106576426 | other | downstream | 2258473 | 20954576 ~ 21004439 (+) |
| G1717161 | LOC106576319 | other | downstream | 3435838 | 22175963 ~ 22180897 (+) |
